RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 S100A14Q9HCY8 104 aa11.51□□□□□ -0.57
CNOT1-217ENST00000569263 TBC1D23Q9NUY8 699 aa11.51□□□□□ -0.57
CNOT1-217ENST00000569263 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
CNOT1-217ENST00000569263 SPTAN1Q13813 2472 aaKnown RBP11.51□□□□□ -0.57
CNOT1-217ENST00000569263 CENPBD1B2RD01 187 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 RAD51DO75771 328 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 SOX14O95416 240 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PPP1R3DO95685 299 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ITGA5P08648 1049 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PGA4P0DJD7 388 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PGA3P0DJD8 388 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PPP3CBP16298 524 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 IGFBP2P18065 325 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PRKACGP22612 351 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 COL8A1P27658 744 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 SDHAP31040 664 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 HOXC12P31275 282 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 SH3BGRP55822 239 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 FXYD6P3P58550 94 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 COX10Q12887 443 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 STK11Q15831 433 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 CEACAM16Q2WEN9 425 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ARMC4Q5T2S8 1044 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ANKRD34AQ69YU3 496 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 GPR139Q6DWJ6 353 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ZDHHC13Q8IUH4 622 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 WDFY1Q8IWB7 410 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ZNF433Q8N7K0 673 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 CLDN22Q8N7P3 220 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 SYT14Q8NB59 555 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 LINC01560Q8TB33 94 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 TEX47Q8TBZ9 253 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 MAGEE2Q8TD90 523 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 DNAJC9Q8WXX5 260 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 TMEM54Q969K7 222 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 S100PBPQ96BU1 408 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 Q96M85 177 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 ERMAPQ96PL5 475 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 PKP2Q99959 881 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 NIPSNAP1Q9BPW8 284 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 SPOCK3Q9BQ16 436 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 CRLF2Q9HC73 371 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 GPR35Q9HC97 309 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 NRIP3Q9NQ35 241 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 GLTPQ9NZD2 209 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 IER3IP1Q9Y5U9 82 aa11.5□□□□□ -0.57
CNOT1-217ENST00000569263 USP9YO00507 2555 aaPredicted RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 UTP20O75691 2785 aaKnown RBP11.5□□□□□ -0.57
CNOT1-217ENST00000569263 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 SH3D21A4FU49 640 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 SAC3D1A6NKF1 404 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 H3BN98 237 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 RPL36A-HNRNPH2H7BZ11 118 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 PDLIM1O00151 329 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 SOCS2O14508 198 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ARHGEF9O43307 516 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 TRMUO75648 421 aaKnown RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 NOS3P29474 1203 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 FOXG1P55316 489 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 MYBPC1Q00872 1141 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 RUNX1T1Q06455 604 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 CLEC12AQ5QGZ9 265 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 PHYHD1Q5SRE7 291 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 OR7E24Q6IFN5 339 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 KLHL17Q6TDP4 642 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 KLHL24Q6TFL4 600 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ZNF771Q7L3S4 317 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 LINGO2Q7L985 606 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ARIH2OSQ8N7S6 290 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 C1orf162Q8NEQ5 155 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ZNF519Q8TB69 540 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 HDAC2Q92769 488 aaKnown RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 RASD2Q96D21 266 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ZC3HAV1LQ96H79 300 aaKnown RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 USB1Q9BQ65 265 aaKnown RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 ALG12Q9BV10 488 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 OR10A4Q9H209 315 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 IL20Q9NYY1 176 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 CRIM1Q9NZV1 1036 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 OAZ3Q9UMX2 235 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 POFUT2Q9Y2G5 429 aa11.49□□□□□ -0.57
CNOT1-217ENST00000569263 MAGED1Q9Y5V3 778 aaPredicted RBP11.49□□□□□ -0.57
CNOT1-217ENST00000569263 BAHCC1Q9P281 2608 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 H7C1C5 153 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 CASKO14936 926 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 BAG2O95816 211 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 QDPRP09417 244 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 APEHP13798 732 aaKnown RBP11.48□□□□□ -0.57
CNOT1-217ENST00000569263 ZNF84P51523 738 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 LCN6P62502 163 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 GABRA6Q16445 453 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 SLC36A3Q495N2 470 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 MESTQ5EB52 335 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 CD300LDQ6UXZ3 194 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 FAM122BQ7Z309 247 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 ADCK1Q86TW2 530 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 JAZF1Q86VZ6 243 aa11.48□□□□□ -0.57
CNOT1-217ENST00000569263 PQLC1Q8N2U9 271 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms