RNA–Protein interactions for RNA: ENST00000558745.5

TSPAN3-205, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,340 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-205ENST00000558745 ABCD4O14678 606 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 PTP4A3O75365 173 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 GADD45GO95257 159 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 RAF1P04049 648 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ITGA2P17301 1181 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 DNASE1P24855 282 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ERFP50548 548 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ART1P52961 327 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ERVK-25P63136 954 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 BNIP1Q12981 228 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ARMC4Q5T2S8 1044 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ANKRD16Q6P6B7 361 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 PGM2L1Q6PCE3 622 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 KLHL24Q6TFL4 600 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 TMPRSS11FQ6ZWK6 438 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 CDK20Q8IZL9 346 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 C1orf162Q8NEQ5 155 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 HDAC2Q92769 488 aaKnown RBP12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ZNF566Q969W8 418 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 SLC25A44Q96H78 314 aaPredicted RBP12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ADAD1Q96M93 576 aaKnown RBP12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 CADM1Q9BY67 442 aaKnown RBP12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 ANKRD19PQ9H560 264 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 IL20RAQ9UHF4 553 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 POFUT2Q9Y2G5 429 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 AMDHD2Q9Y303 409 aa12.08□□□□□ -0.48
TSPAN3-205ENST00000558745 IGKV1D-43A0A0B4J1Z2 117 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 SH3PXD2BA1X283 911 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ZNF99A8MXY4 864 aaPredicted RBP12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 GSC2O15499 205 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 CELA3BP08861 270 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 QDPRP09417 244 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 PATE4P0C8F1 98 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 PGA4P0DJD7 388 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 PGA3P0DJD8 388 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 B4GALT1P15291 398 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ACADSP16219 412 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 CD40P25942 277 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 HOXC12P31275 282 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 CAPZA2P47755 286 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 CLRN1P58418 232 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 UBE2NP61088 152 aaKnown RBP12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 RPS4XP62701 263 aaKnown RBP12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 PIGFQ07326 219 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ZBED5Q49AG3 693 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ZER1Q7Z7L7 766 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 MYPOPQ86VE0 399 aaPredicted RBP12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 C17orf78Q8N4C9 275 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 FGFBP3Q8TAT2 258 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 MCHR2Q969V1 340 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ASB9Q96DX5 294 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 ALPK1Q96QP1 1244 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 TXNIPQ9H3M7 391 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 HEATR1Q9H583 2144 aaKnown RBP12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 NOX3Q9HBY0 568 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 B3GAT2Q9NPZ5 323 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 VNN3Q9NY84 501 aa12.07□□□□□ -0.48
TSPAN3-205ENST00000558745 DSCAMO60469 2012 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 DHHO43323 396 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 DNAJC8O75937 253 aaPredicted RBP12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 SLC2A10O95528 541 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 WNT11O96014 354 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 HLA-HP01893 362 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 ACVR1BP36896 505 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 LIMS1P48059 325 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 FXYD6P3P58550 94 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 FMODQ06828 376 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 ZNF672Q499Z4 452 aaPredicted RBP12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 KLHL17Q6TDP4 642 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 TMEM108Q6UXF1 575 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 ZNF813Q6ZN06 617 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 PIWIL3Q7Z3Z3 882 aaKnown RBP12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 BOD1Q96IK1 185 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 RADILQ96JH8 1075 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 LRGUKQ96M69 825 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 MRPL13Q9BYD1 178 aaKnown RBP12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 MUC13Q9H3R2 512 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 AURKCQ9UQB9 309 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 SIGLEC7Q9Y286 467 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
TSPAN3-205ENST00000558745 ARPC4-TTLL3A0A0A6YYG9 625 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 HTR3EA5X5Y0 456 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 UNC119BA6NIH7 251 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 E7EQL1 145 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 H7C1C5 153 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 IMPA2O14732 288 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 HS3ST1O14792 307 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 OR10H3O60404 316 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 IGHG1P01857 330 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 RPL4P36578 427 aaKnown RBP12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 SLC9A3P48764 834 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 DAP3P51398 398 aaKnown RBP12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 RPL27P61353 136 aaKnown RBP12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 LCN6P62502 163 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 CHRNB3Q05901 458 aa12.05□□□□□ -0.48
TSPAN3-205ENST00000558745 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms