RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 TSPAN5P62079 268 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 LTBQ06643 244 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 EGR3Q06889 387 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 RPL18Q07020 188 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 DLX2Q07687 328 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 IKZF1Q13422 519 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 LGALSLQ3ZCW2 172 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 TCTE1Q5JU00 501 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GLDNQ6ZMI3 551 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 FAM122BQ7Z309 247 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 NUP54Q7Z3B4 507 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 DND1Q8IYX4 353 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 SPICQ8N5J4 248 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 METTL27Q8N6F8 245 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 OR6N2Q8NGY6 317 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GPR148Q8TDV2 347 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 THEM6Q8WUY1 208 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TSEN15Q8WW01 171 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 GCDHQ92947 438 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 CCDC74AQ96AQ1 378 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CLIP3Q96DZ5 547 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 KLHDC7BQ96G42 594 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MOGAT1Q96PD6 335 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 TSSK2Q96PF2 358 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 SORCS2Q96PQ0 1159 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 INTS14Q96SY0 518 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 LPAR4Q99677 370 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GPR174Q9BXC1 333 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 CHIAQ9BZP6 476 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 C12orf10Q9HB07 376 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 PNO1Q9NRX1 252 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 WSB2Q9NYS7 404 aaPredicted RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 TAS2R5Q9NYW4 299 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 GLTPQ9NZD2 209 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 FRRS1LQ9P0K9 344 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 KLK11Q9UBX7 282 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 MRM2Q9UI43 246 aaKnown RBP6.36□□□□□ -1.39
TDP1-213ENST00000555880 FLVCR2Q9UPI3 526 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 EML5Q05BV3 1969 aa6.36□□□□□ -1.39
TDP1-213ENST00000555880 ARPC4-TTLL3A0A0A6YYG9 625 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TRBV5-5A0A0J9YX44 114 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 FAM181BA6NEQ2 426 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TVP23AA6NH52 213 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 SNRPGP15A8MWD9 76 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 PRR32B1ATL7 298 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TMEM150CB9EJG8 249 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 H0YIG0 161 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 ICMTO60725 284 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 UPK3AO75631 287 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 SLC25A12O75746 678 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 RBBP9O75884 186 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 NDUFB6O95139 128 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 MAS1P04201 325 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 CSF1P09603 554 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 ASAH2BP0C7U1 165 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 IFNGR1P15260 489 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TACR3P29371 465 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 IL12BP29460 328 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 RAD52P43351 418 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 SELENOPP49908 381 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 PSMA6P60900 246 aaKnown RBP6.35□□□□□ -1.39
TDP1-213ENST00000555880 EXOSC2Q13868 293 aaKnown RBP6.35□□□□□ -1.39
TDP1-213ENST00000555880 ELOCQ15369 112 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 CD226Q15762 336 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TOR2AQ5JU69 321 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 FAM209AQ5JX71 171 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 CLLU1Q5K131 121 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 FNDC7Q5VTL7 733 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 GLB1L2Q8IW92 636 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 EXD3Q8N9H8 876 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 OR2G2Q8NGZ5 317 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 LRRC20Q8TCA0 184 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 ASB17Q8WXJ9 295 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TMEM106AQ96A25 262 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TOE1Q96GM8 510 aaKnown RBP6.35□□□□□ -1.39
TDP1-213ENST00000555880 MAP6Q96JE9 813 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 SLC46A1Q96NT5 459 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TSPAN32Q96QS1 320 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 SLC38A3Q99624 504 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 MAP3K3Q99759 626 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.35□□□□□ -1.39
TDP1-213ENST00000555880 HEXA-AS1Q9H8Q6 139 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 FKRPQ9H9S5 495 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 ANKRD10Q9NXR5 420 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 STEAP1Q9UHE8 339 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 CD207Q9UJ71 328 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 GMEB2Q9UKD1 530 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 FBXL3Q9UKT7 428 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 CYP8B1Q9UNU6 501 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 KLHDC2Q9Y2U9 406 aa6.35□□□□□ -1.39
TDP1-213ENST00000555880 TEX51A0A1B0GUA7 166 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 OR2W5A6NFC9 320 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 FRG2CA6NGY1 282 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 OR4C45A6NMZ5 311 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 H7C1C5 153 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 I3L521 148 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 SHOXO15266 292 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 XRCC3O43542 346 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 HCRTR2O43614 444 aa6.34□□□□□ -1.39
TDP1-213ENST00000555880 CDC40O60508 579 aaKnown RBP eCLIP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms