RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 MED10Q9BTT4 135 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 FICDQ9BVA6 458 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 FUNDC2Q9BWH2 189 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 ULBP1Q9BZM6 244 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 SLIRPQ9GZT3 109 aaKnown RBP4□□□□□ -1.77
ATXN3-227ENST00000554491 RAB1BQ9H0U4 201 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 CDT1Q9H211 546 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 SLC38A1Q9H2H9 487 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 SLCO5A1Q9H2Y9 848 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 WDCPQ9H6R7 721 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 CWH43Q9H720 699 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 PTGES2Q9H7Z7 377 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 C1orf109Q9NX04 203 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 SPG21Q9NZD8 308 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 CNIH4Q9P003 139 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 STOX2Q9P2F5 926 aaPredicted RBP4□□□□□ -1.77
ATXN3-227ENST00000554491 OSGIN1Q9UJX0 560 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 FBXL2Q9UKC9 423 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 KLK13Q9UKR3 277 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 PADI2Q9Y2J8 665 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 RAI2Q9Y5P3 530 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 TEX264Q9Y6I9 313 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 F5P12259 2224 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 ASCC3Q8N3C0 2202 aaKnown RBP4□□□□□ -1.77
ATXN3-227ENST00000554491 CACNA1EQ15878 2313 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 DOPEY1Q5JWR5 2465 aa4□□□□□ -1.77
ATXN3-227ENST00000554491 KALRNO60229 2985 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 ASXL3Q9C0F0 2248 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 MUC22E2RYF6 1773 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 DOPEY2Q9Y3R5 2298 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TRAV25A0A0B4J276 109 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TRBV11-1A0A0K0K1C0 115 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SMIM30A4D0T7 59 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CXorf65A6NEN9 183 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 OR2AG2A6NM03 316 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TRIM49D1C9J1S8 452 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 E5RJQ4 531 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 ANHXE9PGG2 379 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 J3QKU1 62 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 KLF11O14901 512 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 MYL12BO14950 172 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 ARPC3O15145 178 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 OGG1O15527 345 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CYB5BO43169 146 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PPIHO43447 177 aaKnown RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TGOLN2O43493 480 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TCF21O43680 179 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SCGB2A1O75556 95 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TUSC2O75896 110 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PAPSS2O95340 614 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 FTLP02792 175 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 RPN2P04844 631 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 HOXB5P09067 269 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CSF1P09603 554 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 HNRNPA1P09651 372 aaKnown RBP eCLIP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 OR8U8P0C7N1 319 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 LAMP2P13473 410 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 HLA-GP17693 338 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 MYL12AP19105 171 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CA4P22748 312 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 LHCGRP22888 699 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 DPP4P27487 766 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CD82P27701 267 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 HTR1BP28222 390 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PPIFP30405 207 aaKnown RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 HOXA13P31271 388 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 OTX2P32243 289 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PTGER4P35408 488 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CDX1P47902 265 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 GCLMP48507 274 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PXNP49023 591 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CXCR3P49682 368 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 MMP15P51511 669 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 DLX5P56178 289 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PTENP60484 403 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CCL7P80098 99 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 MRPS6P82932 125 aaKnown RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 DEFA5Q01523 94 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 CAV1Q03135 178 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 EMX1Q04741 257 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SRSF1Q07955 248 aaKnown RBP eCLIP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TRAF3Q13114 568 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SLAMF1Q13291 335 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SERTAD2Q14140 314 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 DPYSL3Q14195 570 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PTPRCAPQ14761 206 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 RBMS2Q15434 407 aaKnown RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 FCN2Q15485 313 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 OR4D1Q15615 310 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 TRIP6Q15654 476 aaKnown RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 NEDD8Q15843 81 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 ZBTB6Q15916 424 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 ISXQ2M1V0 245 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 FAM74A1Q5RGS3 127 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PHYHD1Q5SRE7 291 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SYT6Q5T7P8 510 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PRAMEF8Q5VWM4 474 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 PRAMEF7Q5VXH5 474 aa3.99□□□□□ -1.77
ATXN3-227ENST00000554491 SFRP4Q6FHJ7 346 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-227ENST00000554491 FIGLAQ6QHK4 219 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms