RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 G3V4G9 280 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FCN1O00602 326 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ABCD4O14678 606 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 TM9SF1O15321 606 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 RAMP1O60894 148 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF254O75437 659 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FLOT1O75955 427 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 CIAO1O76071 339 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 SLC25A27O95847 323 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 NDUFB10O96000 172 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 OPN1LWP04000 364 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 STSP08842 583 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 UQCRFS1P1P0C7P4 283 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 POU2F1P14859 743 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 MAGEA8P43361 318 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 BDKRB1P46663 353 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 CCT3P49368 545 aaKnown RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 STARP49675 285 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 RND3P61587 244 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 DYNLL1P63167 89 aaKnown RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 TLE4Q04727 773 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 KLRC3Q07444 240 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 RIPPLY1Q0D2K3 151 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 NDUFA9Q16795 377 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 CYP51A1Q16850 503 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ATL3Q6DD88 541 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 PYHIN1Q6K0P9 492 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FAHD2BQ6P2I3 314 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 IL34Q6ZMJ4 242 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 TPRA1Q86W33 373 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FAM228AQ86W67 206 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 C15orf54Q8N8G6 183 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 CCDC71LQ8N9Z2 235 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 OR4D5Q8NGN0 318 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 PHOSPHO2Q8TCD6 241 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 SLC2A14Q8TDB8 520 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF721Q8TF20 911 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 MRPS31Q92665 395 aaKnown RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 STMN2Q93045 179 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 NEIL2Q969S2 332 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FGGYQ96C11 551 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 EFHD2Q96C19 240 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FAHD2AQ96GK7 314 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 MS4A14Q96JA4 679 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 SLC6A7Q99884 636 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 UPF3BQ9BZI7 483 aaKnown RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 NCOR1P1Q9H4R4 102 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ZNF385DQ9H6B1 395 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 AZI2Q9H6S1 392 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 METTL7AQ9H8H3 244 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
SCFD1-210ENST00000553693 EHFQ9NZC4 300 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 SPATA7Q9P0W8 599 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 IKZF2Q9UKS7 526 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 N6AMT1Q9Y5N5 214 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 FANCIQ9NVI1 1328 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 DMXL1Q9Y485 3027 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 ROBO3Q96MS0 1386 aa2.36□□□□□ -2.03
SCFD1-210ENST00000553693 VPS13AQ96RL7 3174 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 PLXNA3P51805 1871 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ZDBF2Q9HCK1 2354 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ZFHX4Q86UP3 3567 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 IGKV2-28A0A075B6P5 120 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 IGKV2D-24A0A075B6R9 120 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 IQANK1A0A1B0GTG1 560 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 SMIM28A0A1B0GU29 152 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CCDC182A6NF36 153 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 LRRIQ4A6NIV6 560 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 A8MXQ7 604 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 BTN3A3O00478 584 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RGS16O15492 202 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 MBTPS2O43462 519 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TIMM8AO60220 97 aaPredicted RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 KLHL41O60662 606 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FCMRO60667 390 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 FOXH1O75593 365 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CABYRO75952 493 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 DIRAS1O95057 198 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CLDN9O95484 217 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TSPAN12O95859 305 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 IGKV2D-28P01615 120 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 MCF2P10911 925 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 GCAP28676 217 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 GNA11P29992 359 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 UGT1A5P35504 534 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RBMXP38159 391 aaKnown RBP2.35□□□□□ -2.03
SCFD1-210ENST00000553693 ATP1B3P54709 279 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 SEC61GP60059 68 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 DEFB103AP81534 67 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 OGDHQ02218 1023 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 RAB40BQ12829 278 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 GPNMBQ14956 572 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 KLHL38Q2WGJ6 581 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TRIM16LQ309B1 348 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 GGTA1PQ4G0N0 100 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 TCEAL5Q5H9L2 206 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CTSL3PQ5NE16 218 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 PDZK1Q5T2W1 519 aa2.35□□□□□ -2.03
SCFD1-210ENST00000553693 CARD17Q5XLA6 110 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms