RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 RFPL4AA6NLU0 287 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 RFPL4AL1F8VTS6 287 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 H0Y8X5 98 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 H7C417 338 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 DOK2O60496 412 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 RNGTTO60942 597 aaKnown RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 ICOSLGO75144 302 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 CSN2P05814 226 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 C4BPBP20851 252 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 AP3S2P59780 193 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SNRPEP62304 92 aaKnown RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 LTBQ06643 244 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 PRDX1Q06830 199 aaKnown RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 EXOSC7Q15024 291 aaKnown RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 IRF4Q15306 451 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 TAF13Q15543 124 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 DEFB110Q30KQ9 67 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 ASPHD2Q6ICH7 369 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 TANGO2Q6ICL3 276 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 RPL22L1Q6P5R6 122 aaKnown RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 HAGHLQ6PII5 290 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 OOSP2Q86WS3 158 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 OR4A4PQ8NGN8 299 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SFXN5Q8TD22 340 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SFT2D1Q8WV19 159 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SMARCD2Q92925 531 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 RERGQ96A58 199 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 RSPRY1Q96DX4 576 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 CPNE2Q96FN4 548 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF764Q96H86 408 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 LINC00615Q96LM1 132 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 HSPA12BQ96MM6 686 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 TOX2Q96NM4 488 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 VRK1Q99986 396 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF471Q9BX82 626 aaPredicted RBP4.42□□□□□ -1.7
LIMA1-214ENST00000552783 BCL2L14Q9BZR8 327 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SLC25A32Q9H2D1 315 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 APMAPQ9HDC9 416 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 PRSS16Q9NQE7 514 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 STARD5Q9NSY2 213 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 HAO2Q9NYQ3 351 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 MTFP1Q9UDX5 166 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SERGEFQ9UGK8 458 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 CHRNA9Q9UGM1 479 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 SPACA6W5XKT8 324 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 FREM2Q5SZK8 3169 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 FRYLO94915 3013 aa4.42□□□□□ -1.7
LIMA1-214ENST00000552783 TRAV18A0A075B6X5 111 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM72A0PK05 275 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 H7C1C5 153 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CLEC3AO75596 197 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RBBP9O75884 186 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RCBTB2O95199 551 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ITGA5P08648 1049 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 RD3LP0DJH9 198 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CPMP14384 443 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 HPGDP15428 266 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PVALBP20472 110 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 STARP49675 285 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 EMDP50402 254 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PGDP52209 483 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PRMT2P55345 433 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 LCN6P62502 163 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 DUSP8Q13202 625 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SLC22A6Q4U2R8 563 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ARMC6Q6NXE6 501 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZCCHC12Q6PEW1 402 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 BAIAP2L2Q6UXY1 529 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PRSS41Q7RTY9 318 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 PRSS58Q8IYP2 241 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GJD3Q8N144 294 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 METTL27Q8N6F8 245 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 NPEPL1Q8NDH3 523 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 TMEM52Q8NDY8 209 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR4S1Q8NGB4 309 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR4N2Q8NGD1 307 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 OR6N1Q8NGY5 312 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GLYATL2Q8WU03 294 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 EDARADDQ8WWZ3 215 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SLC39A7Q92504 469 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 FOXN4Q96NZ1 517 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 CNN2Q99439 309 aaKnown RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SLC19A3Q9BZV2 496 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 EXO5Q9H790 373 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ACKR4Q9NPB9 350 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 IL23AQ9NPF7 189 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GSN-AS1Q9NRJ2 163 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 NDRG3Q9UGV2 375 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MKL2Q9ULH7 1088 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ZNF281Q9Y2X9 895 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MED31Q9Y3C7 131 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 SPAG17Q6Q759 2223 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 ARPC4-TTLL3A0A0A6YYG9 625 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 C17orf113A0A1B0GUU1 675 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 A0A1B0GWA3 101 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 UBE2QL1A1L167 161 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 GALR2O43603 387 aaPredicted RBP4.41□□□□□ -1.7
LIMA1-214ENST00000552783 FADS1O60427 444 aa4.41□□□□□ -1.7
LIMA1-214ENST00000552783 MOSPD3O75425 235 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms