RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 MCIDASD6RGH6 385 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 NDUFAB1O14561 156 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 SSX4O60224 188 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 LY6G6DO95868 133 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 IGLV1-44P01699 117 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 PATE4P0C8F1 98 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 TCN1P20061 433 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 APOBEC3AP31941 199 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 MSX2P35548 267 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 RIPPLY3P57055 190 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 CLRN1P58418 232 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 ZNF544Q6NX49 715 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 TBPL2Q6SJ96 375 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 TSEN54Q7Z6J9 526 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 BIVMQ86UB2 503 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 NRMQ8IXM6 262 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 MAPK1IP1LQ8NDC0 245 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 GEMIN6Q8WXD5 167 aaKnown RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 BPIFA2Q96DR5 249 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 SLC25A44Q96H78 314 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 COX4I2Q96KJ9 171 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 KATNB1Q9BVA0 655 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 GRIP2Q9C0E4 1043 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 INIPQ9NRY2 104 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 MAN2C1Q9NTJ4 1040 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 B3GNT2Q9NY97 397 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 ALPK2Q86TB3 2170 aa11.16□□□□□ -0.62
TRAPPC4-205ENST00000525079 VPS13CQ709C8 3753 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 ZNF469Q96JG9 3925 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 RNF223E7ERA6 249 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 TRMUO75648 421 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 QDPRP09417 244 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 PGA4P0DJD7 388 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 PGA3P0DJD8 388 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 MAKP20794 623 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 PAX7P23759 505 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 ARR3P36575 388 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 PTDSS1P48651 473 aaKnown RBP11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 HGFACQ04756 655 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 TRAM2Q15035 370 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 GSG1Q2KHT4 349 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 MST1LQ2TV78 715 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 IGFN1Q86VF2 1251 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 SKA3Q8IX90 412 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 CCDC36Q8IYA8 594 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 OFCC1Q8IZS5 231 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 FAM86B1Q8N7N1 296 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 FAM169BQ8N8A8 192 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 FGFBP3Q8TAT2 258 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 ASB10Q8WXI3 467 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 MS4A3Q96HJ5 214 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 ZNF347Q96SE7 839 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 CA10Q9NS85 328 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 ZNF224Q9NZL3 707 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 TAGLN3Q9UI15 199 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 RPS6KA6Q9UK32 745 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 V9GYQ6 96 aa11.15□□□□□ -0.62
TRAPPC4-205ENST00000525079 TRAV27A0A087WT01 109 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 A0A087WUU8 490 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 IGHV2OR16-5A0A0B4J2B6 119 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 DHHO43323 396 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 DCTN3O75935 186 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 PRSS23O95084 383 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 IGF2P01344 180 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 IGHG1P01857 330 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 SAGP10523 405 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 ACADSP16219 412 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 RAB1AP62820 205 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 PRKCDQ05655 676 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 CHRNB3Q05901 458 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 TOP3AQ13472 1001 aaPredicted RBP11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 RAB35Q15286 201 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 C3orf36Q3SXR2 165 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 ALG10Q5BKT4 473 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF730Q6ZMV8 503 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 ZNF627Q7L945 461 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR51A7Q8NH64 312 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 MCHR2Q969V1 340 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 TNFRSF13CQ96RJ3 184 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 CDRT15Q96T59 188 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 SH3GL3Q99963 347 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 ENPP4Q9Y6X5 453 aa11.14□□□□□ -0.63
TRAPPC4-205ENST00000525079 EFCAB9A8MZ26 197 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 hCG_2039718K7EN88 272 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 DYNC1I1O14576 645 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 GMNNO75496 209 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 LY6HO94772 140 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 DIRAS1O95057 198 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 OR4A8P0C604 315 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 TSPAN19P0C672 248 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 THBS4P35443 961 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 SERPINF1P36955 418 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 GPR4P46093 362 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 GIPRP48546 466 aa11.13□□□□□ -0.63
TRAPPC4-205ENST00000525079 DAP3P51398 398 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms