RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 KRT33AO76009 404 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 NDUFB2O95178 105 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 GADD45GO95257 159 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 CD14P08571 375 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 BIDP55957 195 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 MRPS34P82930 218 aaKnown RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 ARF1P84077 181 aaKnown RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 MS4A2Q01362 244 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 PHYHD1Q5SRE7 291 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 SYT9Q86SS6 491 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ADCK1Q86TW2 530 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 WFDC8Q8IUA0 241 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 C1orf174Q8IYL3 243 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 ARIH2OSQ8N7S6 290 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 OR4F15Q8NGB8 312 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 OR4K5Q8NGD3 323 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 RNF217Q8TC41 542 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 GNPDA2Q8TDQ7 276 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 HS3ST6Q96QI5 342 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 LRMDAQ9H2I8 198 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 YY1AP1Q9H869 796 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 CRLF2Q9HC73 371 aa8.27□□□□□ -1.09
CLK4-209ENST00000521621 VSX1Q9NZR4 365 aaPredicted RBP8.27□□□□□ -1.09
CLK4-209ENST00000521621 PDZD2O15018 2839 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 GSC2O15499 205 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 DHHO43323 396 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 PIP5K1CO60331 668 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 TRMUO75648 421 aaKnown RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 DANCRP0C864 163 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 AQP2P41181 271 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 FOXG1P55316 489 aaPredicted RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 BSPH1Q075Z2 132 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 TSPAN31Q12999 210 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 CEACAM16Q2WEN9 425 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 DEFB113Q30KQ7 82 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 LRFN4Q6PJG9 635 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 KLHL24Q6TFL4 600 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 RRM2BQ7LG56 351 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 OAFQ86UD1 273 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 KDM8Q8N371 416 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 RNF148Q8N7C7 305 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 DNAJC9Q8WXX5 260 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 SLC38A2Q96QD8 506 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 ULBP2Q9BZM5 246 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 TMEM38BQ9NVV0 291 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 POFUT2Q9Y2G5 429 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 LYVE1Q9Y5Y7 322 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 SPTAN1Q13813 2472 aaKnown RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 UNC119BA6NIH7 251 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 UBE2NP61088 152 aaKnown RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 CHRNB3Q05901 458 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 SNTB1Q13884 538 aaKnown RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 SEC23BQ15437 767 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 KCNMB1Q16558 191 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 ADGRG5Q8IZF4 528 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 MOSPD2Q8NHP6 518 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 IPCEF1Q8WWN9 437 aaPredicted RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 NRBF2Q96F24 287 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 RSRC1Q96IZ7 334 aaKnown RBP8.26□□□□□ -1.09
CLK4-209ENST00000521621 FOXB1Q99853 325 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 DHRS9Q9BPW9 319 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 ZNF442Q9H7R0 627 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 FAIMQ9NVQ4 179 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 MED29Q9NX70 200 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 UGT2A1Q9Y4X1 527 aa8.26□□□□□ -1.09
CLK4-209ENST00000521621 RP1L1Q8IWN7 2480 aaPredicted RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 TRBV4-1A0A0J9YWV2 114 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 KPNA4O00629 521 aaPredicted RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 GSTM3P21266 225 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ZNF84P51523 738 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 IST1P53990 364 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 SHEQ5VZ18 495 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 WDFY1Q8IWB7 410 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 DEPDC4Q8N2C3 294 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 DNAJA3Q96EY1 480 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ALKBH3Q96Q83 286 aaPredicted RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 TMCC3Q9ULS5 477 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 BAIAP2Q9UQB8 552 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 COL12A1Q99715 3063 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 BLOC1S5-TXNDC5H3BN57 136 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 hCG_2039718K7EN88 272 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 CDC42EP2O14613 210 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 PTHP01270 115 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 OR8G3PP0DMU2 310 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 TCN1P20061 433 aaPredicted RBP8.25□□□□□ -1.09
CLK4-209ENST00000521621 AHCYP23526 432 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 SDHAP31040 664 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 EVX1P49640 407 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 COX10Q12887 443 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 TSC22D1Q15714 1073 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 EFNB3Q15768 340 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ETFDHQ16134 617 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 RFX4Q33E94 735 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ANKRD34AQ69YU3 496 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 OR2T5Q6IEZ7 315 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 SMARCD3Q6STE5 483 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 ZER1Q7Z7L7 766 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 OR6N1Q8NGY5 312 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 OR2T29Q8NH02 315 aa8.25□□□□□ -1.09
CLK4-209ENST00000521621 HDAC2Q92769 488 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms