RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 ZFP3Q96NJ6 502 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 GPX7Q96SL4 187 aaPredicted RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 NDEL1Q9GZM8 345 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 RERGLQ9H628 205 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 FAM90A27PA6NNH2 459 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 UPK3AO75631 287 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 ZNF432O94892 652 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 CDH2P19022 906 aaPredicted RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 SDHAP31040 664 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 OPRM1P35372 400 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 CD47Q08722 323 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 DYNC1I2Q13409 638 aaKnown RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 PHYHD1Q5SRE7 291 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 PTCHD4Q6ZW05 846 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 CYB561A3Q8NBI2 242 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 SDR9C7Q8NEX9 313 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 OR6K3Q8NGY3 331 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 HDAC2Q92769 488 aaKnown RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 ZNF566Q969W8 418 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 SLC25A44Q96H78 314 aaPredicted RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 MBOAT4Q96T53 435 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 NMNAT3Q96T66 252 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 SFXN3Q9BWM7 321 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 FAM192AQ9GZU8 254 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 GP6Q9HCN6 339 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 SLC7A10Q9NS82 523 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 PARPBPQ9NWS1 579 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 PROCRQ9UNN8 238 aa12.59□□□□□ -0.39
VPS37A-206ENST00000520140 HELZ2Q9BYK8 2649 aaKnown RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 GCN1Q92616 2671 aaKnown RBP12.59□□□□□ -0.39
VPS37A-206ENST00000520140 DLGAP1O14490 977 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 XKRYO14609 159 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 DVL2O14641 736 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 KRT33AO76009 404 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 CLRN1P58418 232 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 ESRRGP62508 458 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 FMODQ06828 376 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 FAPQ12884 760 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 KRR1Q13601 381 aaKnown RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 PGGHGQ32M88 737 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 MRGPRGQ86SM5 289 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 TMEM123Q8N131 208 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 ARIH2OSQ8N7S6 290 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 RELL2Q8NC24 303 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 OR52E2Q8NGJ4 325 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 OR6N1Q8NGY5 312 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 OR6X1Q8NH79 312 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 OTULINQ96BN8 352 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 FN3KQ9H479 309 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 SMPD3Q9NY59 655 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 ZNF629Q9UEG4 869 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 GPR52Q9Y2T5 361 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 NKX2-6A6NCS4 301 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 J3QKU1 62 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 TRMUO75648 421 aaKnown RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 CDKN2AP42771 156 aaKnown RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 AQP4P55087 323 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 FOXG1P55316 489 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 CDK5Q00535 292 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 TFAP2EQ6VUC0 442 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 LNX2Q8N448 690 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 DRAXINQ8NBI3 349 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 ZNF519Q8TB69 540 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 CA5BP1Q8WTZ4 195 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 TMEM45BQ96B21 275 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 ZNF837Q96EG3 531 aaPredicted RBP12.58□□□□□ -0.4
VPS37A-206ENST00000520140 GABARAPL3Q9BY60 117 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 SLCO5A1Q9H2Y9 848 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 TVP23BQ9NYZ1 205 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 UPB1Q9UBR1 384 aa12.58□□□□□ -0.4
VPS37A-206ENST00000520140 CACNA1CQ13936 2221 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 AKAP8O43823 692 aaKnown RBP12.57□□□□□ -0.4
VPS37A-206ENST00000520140 SLC43A1O75387 559 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 AGFG2O95081 481 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 CLIC3O95833 236 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 CGAP01215 116 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 IGHG1P01857 330 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 IGHMP01871 453 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 CRHP06850 196 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 RNF224P0DH78 156 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 PGA4P0DJD7 388 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 PGA3P0DJD8 388 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 CHRNB4P30926 498 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 OR3A2P47893 321 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 SMSP52788 366 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 LEG1Q6P5S2 330 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 LINGO2Q7L985 606 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 JAZF1Q86VZ6 243 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 CYGBQ8WWM9 190 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 HTRA1Q92743 480 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 FOXN4Q96NZ1 517 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 TSSK2Q96PF2 358 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 SYT4Q9H2B2 425 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 PLSCR4Q9NRQ2 329 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 RCE1Q9Y256 329 aa12.57□□□□□ -0.4
VPS37A-206ENST00000520140 FAM183AA6NL82 134 aa12.56□□□□□ -0.4
VPS37A-206ENST00000520140 ARPC3O15145 178 aa12.56□□□□□ -0.4
VPS37A-206ENST00000520140 CSNK1A1P48729 337 aa12.56□□□□□ -0.4
VPS37A-206ENST00000520140 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.56□□□□□ -0.4
VPS37A-206ENST00000520140 TSC22D1Q15714 1073 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms