RNA–Protein interactions for RNA: ENST00000505874.1

LINC00616-202, long intergenic non-protein coding RNA 616, humanhuman

TSL 3

Gene LINC00616, Length 260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-202ENST00000505874 TCP10Q12799 353 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 GNMTQ14749 295 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 UBE2SQ16763 222 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 TRIM16LQ309B1 348 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 DDX60LQ5H9U9 1706 aaKnown RBP1.87□□□□□ -2.11
LINC00616-202ENST00000505874 TIGD3Q6B0B8 471 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 GALNT17Q6IS24 598 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 CENPUQ71F23 418 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 CALHM3Q86XJ0 350 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 FAM86B1Q8N7N1 296 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF713Q8N859 430 aaPredicted RBP1.87□□□□□ -2.11
LINC00616-202ENST00000505874 FAM184AQ8NB25 1140 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 GMCL1P1Q8NEA9 526 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 CCDC12Q8WUD4 166 aaPredicted RBP1.87□□□□□ -2.11
LINC00616-202ENST00000505874 BMFQ96LC9 184 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 CCNL2Q96S94 520 aaPredicted RBP1.87□□□□□ -2.11
LINC00616-202ENST00000505874 ULBP2Q9BZM5 246 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 SMYD3Q9H7B4 428 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 SIAEQ9HAT2 523 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 LY9Q9HBG7 655 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP1.87□□□□□ -2.11
LINC00616-202ENST00000505874 MTRRQ9UBK8 725 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 ATP6V1DQ9Y5K8 247 aa1.87□□□□□ -2.11
LINC00616-202ENST00000505874 CNTNAP1P78357 1384 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 NID2Q14112 1375 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 PLXNA1Q9UIW2 1896 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 MYO7AQ13402 2215 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ADAMTSL1Q8N6G6 1762 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 TRAV40A0A0B4J280 105 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CLRN2A0PK11 232 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF233A6NK53 670 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 F5H6K3 240 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 MPHOSPH10O00566 681 aaKnown RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 SDHDO14521 159 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 DEXIO95424 95 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 PTMSP20962 102 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 GNA11P29992 359 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 GLP1RP43220 463 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 YBEYP58557 167 aaPredicted RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CACNG7P62955 275 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 EWSR1Q01844 656 aaKnown RBP eCLIP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 KLRC3Q07444 240 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ATP6AP1Q15904 470 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF880Q6PDB4 577 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF620Q6ZNG0 422 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 DPY19L4Q7Z388 723 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ERO1BQ86YB8 467 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ATP6V0D2Q8N8Y2 350 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CCDC148Q8NFR7 591 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 SYNPRQ8TBG9 265 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZFP90Q8TF47 636 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 FGF11Q92914 225 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 EXOSC8Q96B26 276 aaKnown RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 DYNLL2Q96FJ2 89 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 C12orf42Q96LP6 360 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 SPZ1Q9BXG8 430 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 UPF3BQ9BZI7 483 aaKnown RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 PLA2G12AQ9BZM1 189 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 RHBGQ9H310 441 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZSCAN16Q9H4T2 348 aaPredicted RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 FOLH1BQ9HBA9 442 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 HOXC10Q9NYD6 342 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CHMP5Q9NZZ3 219 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 SPASTQ9UBP0 616 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF629Q9UEG4 869 aaPredicted RBP1.86□□□□□ -2.11
LINC00616-202ENST00000505874 IL19Q9UHD0 177 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 TRIP11Q15643 1979 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CASP8AP2Q9UKL3 1982 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 FRMPD4Q14CM0 1322 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 MGAMO43451 1857 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 CEP350Q5VT06 3117 aa1.86□□□□□ -2.11
LINC00616-202ENST00000505874 PAPPA2Q9BXP8 1791 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 OTOFQ9HC10 1997 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 A0A0U1RQV5 110 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 A0A1B0GUS0 222 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 H3BQV1 296 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 DCTN6O00399 190 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 ZBTB5O15062 677 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 MSH4O15457 936 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 IGKV1D-16P01601 117 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 SYT1P21579 422 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 U2AF2P26368 475 aaKnown RBP eCLIP1.85□□□□□ -2.11
LINC00616-202ENST00000505874 GDI1P31150 447 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 KIR2DS4P43632 304 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 ARRB1P49407 418 aaPredicted RBP1.85□□□□□ -2.11
LINC00616-202ENST00000505874 REG3AQ06141 175 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 SPP2Q13103 211 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 PPIL2Q13356 520 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 RIPK1Q13546 671 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 GAMTQ14353 236 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 PDK1Q15118 436 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 STK11Q15831 433 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 ZNF311Q5JNZ3 666 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 SYT10Q6XYQ8 523 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 C19orf35Q6ZS72 473 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 KDM8Q8N371 416 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 OR52P1PQ8NH57 321 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 MCOLN3Q8TDD5 553 aa1.85□□□□□ -2.11
LINC00616-202ENST00000505874 MRPS31Q92665 395 aaKnown RBP1.85□□□□□ -2.11
LINC00616-202ENST00000505874 SMARCD2Q92925 531 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms