RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 FAAP20Q6NZ36 180 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 ZNF615Q8N8J6 731 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 OR6K3Q8NGY3 331 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 C16orf52Q8NHV5 167 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 TMEM106AQ96A25 262 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 KXD1Q9BQD3 176 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 PELOQ9BRX2 385 aaKnown RBP13.6□□□□□ -0.23
SNF8-203ENST00000504000 OR10A5Q9H207 317 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 UBQLN4Q9NRR5 601 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 GRHPRQ9UBQ7 328 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 PRODH2Q9UF12 536 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 OR10H1Q9Y4A9 318 aa13.6□□□□□ -0.23
SNF8-203ENST00000504000 TRAV8-7A0A075B6U6 113 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 GRXCR1A8MXD5 290 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 TRIM77I1YAP6 450 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 HRKO00198 91 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 CD37P11049 281 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 COL9A1P20849 921 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 GRPRP30550 384 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 H2BFSP57053 126 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 MAT1AQ00266 395 aaKnown RBP13.59□□□□□ -0.23
SNF8-203ENST00000504000 DMWDQ09019 674 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 UBXN2BQ14CS0 331 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 GXYLT1Q4G148 440 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 PXDC1Q5TGL8 231 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 MAMSTRQ6ZN01 415 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 ZNF676Q8N7Q3 588 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 EDAQ92838 391 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 PRTFDC1Q9NRG1 225 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 ZNF107Q9UII5 783 aaPredicted RBP13.59□□□□□ -0.23
SNF8-203ENST00000504000 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.59□□□□□ -0.23
SNF8-203ENST00000504000 CDC40O60508 579 aaKnown RBP eCLIP13.59□□□□□ -0.23
SNF8-203ENST00000504000 RENP00797 406 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 TNFP01375 233 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 TMIGD3P0DMS9 266 aaPredicted RBP13.59□□□□□ -0.23
SNF8-203ENST00000504000 PTHLHP12272 177 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 PRSS3P35030 304 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 SOX2P48431 317 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 HSD17B7P56937 341 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 EGR4Q05215 589 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 SKP2Q13309 424 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 GK2Q14410 553 aaPredicted RBP13.59□□□□□ -0.23
SNF8-203ENST00000504000 TUSC1Q2TAM9 212 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 FAM166AQ6J272 317 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 NHLRC1Q6VVB1 395 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 CLEC1AQ8NC01 280 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 C7orf57Q8NEG2 295 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 OR5M9Q8NGP3 310 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 C4orf45Q96LM5 186 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 MOGAT1Q96PD6 335 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 TSSK2Q96PF2 358 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 LPAR4Q99677 370 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 FAM60AQ9NP50 221 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 STARD5Q9NSY2 213 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 UPB1Q9UBR1 384 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 CYB5R1Q9UHQ9 305 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 PRELID1Q9Y255 219 aa13.59□□□□□ -0.23
SNF8-203ENST00000504000 FAM171A2A8MVW0 826 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 DCTN6O00399 190 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 SLC17A2O00624 439 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ARPC5O15511 151 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 PMS2P2O95744 297 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 MAS1P04201 325 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ITGB2P05107 769 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 NAGAP17050 411 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 AKT2P31751 481 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ACTBP60709 375 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ACTG1P63261 375 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
SNF8-203ENST00000504000 MESTQ5EB52 335 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 TFAP2EQ6VUC0 442 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 MUC20Q8N307 709 aaPredicted RBP13.58□□□□□ -0.24
SNF8-203ENST00000504000 PRSS35Q8N3Z0 413 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 OTOSQ8NHW6 89 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 GPX8Q8TED1 209 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ZDHHC1Q8WTX9 485 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 CCDC107Q8WV48 283 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 ASB17Q8WXJ9 295 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 LINC00052Q96N35 136 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 OR1F2PQ96R84 312 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 INTS14Q96SY0 518 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 CDCA3Q99618 268 aaPredicted RBP13.58□□□□□ -0.24
SNF8-203ENST00000504000 SLC25A21Q9BQT8 299 aaPredicted RBP13.58□□□□□ -0.24
SNF8-203ENST00000504000 SLCO5A1Q9H2Y9 848 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 FKRPQ9H9S5 495 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 SCPEP1Q9HB40 452 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 APMAPQ9HDC9 416 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 IKZF2Q9UKS7 526 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 CDV3Q9UKY7 258 aaKnown RBP13.58□□□□□ -0.24
SNF8-203ENST00000504000 FANCMQ8IYD8 2048 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 DOCK8Q8NF50 2099 aa13.58□□□□□ -0.24
SNF8-203ENST00000504000 LRP4O75096 1905 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 EML5Q05BV3 1969 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 LOC100289279A0A1B0GTE1 492 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 C10orf142B7Z368 130 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 H3BUI4 141 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 HCRTR1O43613 425 aa13.57□□□□□ -0.24
SNF8-203ENST00000504000 NSA2O95478 260 aaKnown RBP13.57□□□□□ -0.24
SNF8-203ENST00000504000 RPL18Q07020 188 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms