RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF813Q6ZN06 617 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 TMPRSS11FQ6ZWK6 438 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 LRRC75A-AS1Q8N1F1 130 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 OR52J3Q8NH60 311 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 SLC7A13Q8TCU3 470 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 ASB10Q8WXI3 467 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 SLC38A2Q96QD8 506 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 FOXB1Q99853 325 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 TXNIPQ9H3M7 391 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 KRCC1Q9NPI7 259 aaPredicted RBP11.17□□□□□ -0.62
HSPG2-213ENST00000498495 TAS2R1Q9NYW7 299 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 ACTR3BQ9P1U1 418 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF346Q9UL40 294 aaKnown RBP11.17□□□□□ -0.62
HSPG2-213ENST00000498495 PRPF19Q9UMS4 504 aaKnown RBP11.17□□□□□ -0.62
HSPG2-213ENST00000498495 TMEM5Q9Y2B1 443 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 ATP23Q9Y6H3 246 aa11.17□□□□□ -0.62
HSPG2-213ENST00000498495 POLQO75417 2590 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 TRAV27A0A087WT01 109 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 IGHV1-18A0A0C4DH31 117 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 E7EQL1 145 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 DHHO43323 396 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 TRMUO75648 421 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 GADD45GO95257 159 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 STAMBPO95630 424 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 CRYAAP02489 173 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SEMG1P04279 462 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SOD3P08294 240 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 CD79AP11912 226 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ARR3P36575 388 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 GPR4P46093 362 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 FABP6P51161 128 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 RPS4XP62701 263 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ADAM8P78325 824 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 RUNX1T1Q06455 604 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 PIGFQ07326 219 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SPOCK1Q08629 439 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 TRIM25Q14258 630 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 TAF11Q15544 211 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 PGGHGQ32M88 737 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 C3orf36Q3SXR2 165 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ZBED5Q49AG3 693 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ARMC4Q5T2S8 1044 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 AGAP6Q5VW22 663 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SHEQ5VZ18 495 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF627Q7L945 461 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 PIWIL3Q7Z3Z3 882 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 DHFR2Q86XF0 187 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 FAM169BQ8N8A8 192 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SYT14Q8NB59 555 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 MCHR2Q969V1 340 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 GTPBP3Q969Y2 492 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 PERPQ96FX8 193 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 FAM46AQ96IP4 442 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF347Q96SE7 839 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 SEPHS2Q99611 448 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 DHRS9Q9BPW9 319 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 THTPAQ9BU02 230 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 MRPL13Q9BYD1 178 aaKnown RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 MUC13Q9H3R2 512 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 IL1RAPQ9NPH3 570 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 CRNNQ9UBG3 495 aaPredicted RBP11.16□□□□□ -0.62
HSPG2-213ENST00000498495 MOKQ9UQ07 419 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 AURKCQ9UQB9 309 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 LRBAP50851 2863 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 DSCAMO60469 2012 aa11.16□□□□□ -0.62
HSPG2-213ENST00000498495 AKAP6Q13023 2319 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 NPIPB13A6NJU9 1138 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 NPIPB4C9JG80 1138 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ENTPD5O75356 428 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 PDE5AO76074 875 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 FARS2O95363 451 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 IGKV3-15P01624 115 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 OR8G3PP0DMU2 310 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 NR2C1P13056 603 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 B4GALT1P15291 398 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TTKP33981 857 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 RPL4P36578 427 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ACVR1BP36896 505 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ZNF84P51523 738 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 IDH3GP51553 393 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 RPL27P61353 136 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 MYBPC1Q00872 1141 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 MS4A2Q01362 244 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 SPIBQ01892 262 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TOP3AQ13472 1001 aaPredicted RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 HIST3H3Q16695 136 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 IQCCQ4KMZ1 466 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 MTX3Q5HYI7 312 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 IGFN1Q86VF2 1251 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TGIF2LYQ8IUE0 185 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 ZDHHC21Q8IVQ6 265 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 FBXL14Q8N1E6 418 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 LRRC75AQ8NAA5 344 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 OR4K5Q8NGD3 323 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 OR13C2Q8NGS9 318 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 IGFBPL1Q8WX77 278 aa11.15□□□□□ -0.62
HSPG2-213ENST00000498495 NANOS1Q8WY41 292 aaKnown RBP11.15□□□□□ -0.62
HSPG2-213ENST00000498495 TRMT61AQ96FX7 289 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms