RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 GALP22466 123 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 RAC3P60763 192 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 MRPL49Q13405 166 aaKnown RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 TMEM244Q5VVB8 128 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 UNQ6126/PRO20091Q6UXV3 157 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 TPRA1Q86W33 373 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 FAM109AQ8N4B1 249 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 FADS6Q8N9I5 356 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 OR2M7Q8NG81 312 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 MIB2Q96AX9 1013 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 SLC25A44Q96H78 314 aaPredicted RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 C1orf198Q9H425 327 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 MOB1AQ9H8S9 216 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 A3GALT2U3KPV4 340 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 SLC19A2O60779 497 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 DXOO77932 396 aaKnown RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 IL1AP01583 271 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 IGHMP01871 453 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 ERCC1P07992 297 aaPredicted RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 GABRB1P18505 474 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 NPR2P20594 1047 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 GADD45AP24522 165 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 HSD17B12Q53GQ0 312 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 VASNQ6EMK4 673 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 ARSKQ6UWY0 536 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 BAIAP2L2Q6UXY1 529 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 COMTD1Q86VU5 262 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 OR5AK2Q8NH90 309 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 UBE2FQ969M7 185 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 C4orf36Q96KX1 117 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 OR2B2Q9GZK3 357 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 CAMK2AQ9UQM7 478 aa7.55□□□□□ -1.2
USP54-215ENST00000497106 NOSIPQ9Y314 301 aaKnown RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 CHCHD2Q9Y6H1 151 aaPredicted RBP7.55□□□□□ -1.2
USP54-215ENST00000497106 hCG_2014768A0A024R1R8 64 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 A0A1W2PNV4 684 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 AQP7P3A6NL99 342 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TMEM212A6NML5 194 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 RPP14O95059 124 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 APOL3O95236 402 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 CPEP16870 476 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 FUT4P22083 530 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TGFBR3Q03167 851 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 RNPS1Q15287 305 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 BCL2L15Q5TBC7 163 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TRIQKQ629K1 86 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 DPPA2Q7Z7J5 298 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 UBE2J2Q8N2K1 259 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 NEIL3Q8TAT5 605 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TMIGD2Q96BF3 282 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 ENKD1Q9H0I2 346 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 MED20Q9H944 212 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 EMC9Q9Y3B6 208 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 CEP192Q8TEP8 1941 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 MEGF11A6BM72 1044 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 PROB1E7EW31 1015 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 SP1P08047 785 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 PER3P56645 1201 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 SRYQ05066 204 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 B3GNTL1Q67FW5 361 aaPredicted RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 ZNF283Q8N7M2 679 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 C19orf18Q8NEA5 215 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TSPAN32Q96QS1 320 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 WFDC6Q9BQY6 131 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 WACQ9BTA9 647 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 PALMDQ9NP74 551 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 GLRX2Q9NS18 164 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 SNTG1Q9NSN8 517 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 ADAM18Q9Y3Q7 739 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TRDV1A0A1B0GX56 115 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 A0A1W2PPW3 197 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 OR2M5A3KFT3 312 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 PEX14O75381 377 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 CDRT1O95170 752 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 LYPD3O95274 346 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 GYPBP06028 91 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 GDI2P50395 445 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 VBP1P61758 197 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 RPS4XP62701 263 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 GRB2P62993 217 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 GGTLC2Q14390 218 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 EIF2S3LQ2VIR3 472 aaKnown RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 APOOLQ6UXV4 268 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 ATCAYQ86WG3 371 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 LRRC17Q8N6Y2 441 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 OR6X1Q8NH79 312 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 GPR148Q8TDV2 347 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 NDUFB11Q9NX14 153 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 DHDHQ9UQ10 334 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 ZNF593O00488 134 aaPredicted RBP7.54□□□□□ -1.2
USP54-215ENST00000497106 SLC2A10O95528 541 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 LAP3P28838 519 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 SIRPAP78324 504 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 PITPNAQ00169 270 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 ACSM1Q08AH1 577 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 ECH1Q13011 328 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 TPBGQ13641 420 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 MELKQ14680 651 aa7.54□□□□□ -1.2
USP54-215ENST00000497106 THSD4Q6ZMP0 1018 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms