RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
COL4A6-207ENST00000487645 DOPEY2Q9Y3R5 2298 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 SAC3D1A6NKF1 404 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF587BE7ETH6 402 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 H0YHG0 523 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 C16orf97H3BN30 126 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PDLIM1O00151 329 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 UPK3AO75631 287 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 IGHV3-9P01782 118 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PGA4P0DJD7 388 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PGA3P0DJD8 388 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 NR2C1P13056 603 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PSMB1P20618 241 aaKnown RBP11.74□□□□□ -0.53
COL4A6-207ENST00000487645 COX5AP20674 150 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 MPGP29372 298 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PEX19P40855 299 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 GIPRP48546 466 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 CSNK1A1P48729 337 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 CLRN1P58418 232 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ESRRGP62508 458 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 PPP2R2BQ00005 443 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 FAM27E3Q08E93 113 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 MELKQ14680 651 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 RCN1Q15293 331 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 STK11Q15831 433 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 SFRP5Q5T4F7 317 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 CARD17Q5XLA6 110 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ANKRD34AQ69YU3 496 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 STAC2Q6ZMT1 411 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.74□□□□□ -0.53
COL4A6-207ENST00000487645 WDFY1Q8IWB7 410 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 BOD1Q96IK1 185 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 Q96M85 177 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF570Q96NI8 536 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ERMAPQ96PL5 475 aaPredicted RBP11.74□□□□□ -0.53
COL4A6-207ENST00000487645 KCNK17Q96T54 332 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 CIB1Q99828 191 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ALG12Q9BV10 488 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 TSSK6Q9BXA6 273 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 GPR35Q9HC97 309 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 KRT84Q9NSB2 600 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 TBC1D23Q9NUY8 699 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 TAS2R16Q9NYV7 291 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ENOPH1Q9UHY7 261 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 GPR52Q9Y2T5 361 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 ADAM18Q9Y3Q7 739 aa11.74□□□□□ -0.53
COL4A6-207ENST00000487645 H3BN98 237 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 BHLHE40O14503 412 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 XKRYO14609 159 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ARHGEF9O43307 516 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 PPP1R3DO95685 299 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 IGHV1-2P23083 117 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 UGT2B10P36537 528 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF133P52736 654 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 CDK5Q00535 292 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 SORDQ00796 357 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ROR2Q01974 943 aaKnown RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 TGFBR3Q03167 851 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 RUNX1T1Q06455 604 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 LGALS3BPQ08380 585 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 TOP3AQ13472 1001 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 DAG1Q14118 895 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 SLC36A3Q495N2 470 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 THEM4Q5T1C6 240 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 C1QTNF12Q5T7M4 302 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 OR7E24Q6IFN5 339 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 LRFN4Q6PJG9 635 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ZBTB49Q6ZSB9 765 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ADCK1Q86TW2 530 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 CXorf67Q86X51 503 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 LNX2Q8N448 690 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 ZNF433Q8N7K0 673 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 STEAP2Q8NFT2 490 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 OR2T33Q8NG76 320 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 OR8D4Q8NGM9 314 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 TEX47Q8TBZ9 253 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 MAGEE2Q8TD90 523 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 HDAC2Q92769 488 aaKnown RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 PSMG3-AS1Q96PY0 264 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 RBP7Q96R05 134 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 SNX18Q96RF0 628 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 PLA2G12AQ9BZM1 189 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 USE1Q9NZ43 259 aa11.73□□□□□ -0.53
COL4A6-207ENST00000487645 TMEFF2Q9UIK5 374 aaPredicted RBP11.73□□□□□ -0.53
COL4A6-207ENST00000487645 USP9YO00507 2555 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 TEX13CA0A0J9YWL9 993 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 PRSS37A4D1T9 235 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 M0R3G1 203 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 SOX14O95416 240 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 CLDN1O95832 211 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 ALPLP05186 524 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 ITGA5P08648 1049 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 IGFBP1P08833 259 aaPredicted RBP11.72□□□□□ -0.53
COL4A6-207ENST00000487645 QDPRP09417 244 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 PPP3CBP16298 524 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 IGFBP5P24593 272 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 NOS3P29474 1203 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 ALDH3A2P51648 485 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 CRISP1P54107 249 aa11.72□□□□□ -0.53
COL4A6-207ENST00000487645 SH3BGRP55822 239 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms