RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 SLC22A25Q6T423 547 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 TMEM179BQ7Z7N9 219 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 PSMF1Q92530 271 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 DUSP22Q9NRW4 184 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 RAB22AQ9UL26 194 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 PCDHB10Q9UN67 800 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 KIF13AQ9H1H9 1805 aa15.15■□□□□ 0.02
COL7A1-210ENST00000487017 NSG1A0A0A6YYJ2 146 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 K7ESM1 405 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 MSTNO14793 375 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TXNL1O43396 289 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TGM4P49221 684 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 C17orf67Q0P5P2 114 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 CDKN3Q16667 212 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 ARHGAP11BQ3KRB8 267 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 PGAP1Q75T13 922 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TMEM43Q9BTV4 400 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 DOK2O60496 412 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 CBX7O95931 251 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 IL32P24001 234 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 LYSMD4Q5XG99 296 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 CD300LGQ6UXG3 332 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TAF1P21675 1872 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 RPS10-NUDT3A0A1W2PQS6 291 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 RPS10P46783 165 aaKnown RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 MRPL19P49406 292 aaKnown RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 SLC35A1P78382 337 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 IHHQ14623 411 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 ZNF684Q5T5D7 378 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 PAQR6Q6TCH4 344 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 WDR88Q6ZMY6 472 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 SCARB1Q8WTV0 552 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 SGK3Q96BR1 496 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 FYTTD1Q96QD9 318 aaKnown RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 PDCD1LG2Q9BQ51 273 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 ULBP3Q9BZM4 244 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 OCEL1Q9H607 264 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 FKRPQ9H9S5 495 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 H3BQ06 376 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 OR7C1O76099 320 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 EDN3P14138 238 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TGFBR1P36897 503 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 LTC4SQ16873 150 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 FAHD1Q6P587 224 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 BPHLQ86WA6 291 aaPredicted RBP15.14■□□□□ 0.01
COL7A1-210ENST00000487017 TMEM99Q8N816 258 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 PLPP7Q8NBV4 271 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 SLC6A18Q96N87 628 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 OR52A1Q9UKL2 312 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 D6RAR5 112 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 GABARAPH6UMI1 98 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 HOXA9P31269 272 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 CDC20Q12834 499 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 ZNF620Q6ZNG0 422 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 LANCL3Q6ZV70 420 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 PLEKHM1Q9Y4G2 1056 aa15.14■□□□□ 0.01
COL7A1-210ENST00000487017 ZNF705GA8MUZ8 300 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-210ENST00000487017 SGCEO43556 437 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 THBS1P07996 1170 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 CALCBP10092 127 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ZNF93P35789 620 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-210ENST00000487017 MSMO1Q15800 293 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 KIAA0907Q7Z7F0 614 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ISYNA1Q9NPH2 558 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 A0A1W2PPV4 95 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 DDAH2O95865 285 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 TGFBR3Q03167 851 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 MZT1Q08AG7 82 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 RSPO2Q6UXX9 243 aaPredicted RBP15.13■□□□□ 0.01
COL7A1-210ENST00000487017 TMUB2Q71RG4 321 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 FGGYQ96C11 551 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 RPH3ALQ9UNE2 315 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ADAMTSL3P82987 1691 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ARRDC5A6NEK1 342 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 CEBPZOSA8MTT3 80 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 SCRG1O75711 98 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 NID1P14543 1247 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 NME2P22392 152 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 CYHR1Q6ZMK1 362 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 MDGA2Q7Z553 956 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 Q96M85 177 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 OR14J1Q9UGF5 321 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ANKRD34BA5PLL1 514 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 A8MVM7 634 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 TOR1AO14656 332 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ICMTO60725 284 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 CLN5O75503 358 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ZDHHC11BP0C7U3 371 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ADIPOR2Q86V24 386 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 OR5D18Q8NGL1 313 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 SLC35A4Q96G79 324 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 POFUT1Q9H488 388 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 ACOXLQ9NUZ1 547 aa15.13■□□□□ 0.01
COL7A1-210ENST00000487017 A0A1W2PR48 441 aa15.12■□□□□ 0.01
COL7A1-210ENST00000487017 OR6C65A6NJZ3 312 aa15.12■□□□□ 0.01
COL7A1-210ENST00000487017 MRPL33O75394 65 aaKnown RBP15.12■□□□□ 0.01
COL7A1-210ENST00000487017 PMP2P02689 132 aa15.12■□□□□ 0.01
COL7A1-210ENST00000487017 GABRA2P47869 451 aa15.12■□□□□ 0.01
COL7A1-210ENST00000487017 UBE2KP61086 200 aa15.12■□□□□ 0.01
COL7A1-210ENST00000487017 MFAP5Q13361 173 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms