RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 ZC3H3Q8IXZ2 948 aaKnown RBP9.52□□□□□ -0.89
COL12A1-207ENST00000483888 C11orf42Q8N5U0 333 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 OR52D1Q9H346 318 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 METTL7AQ9H8H3 244 aa9.52□□□□□ -0.89
COL12A1-207ENST00000483888 KIF13BQ9NQT8 1826 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF541Q9H0D2 1346 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TEX50A0A1B0GTY4 177 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 FRS3O43559 492 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 POU3F3P20264 500 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 HTR1FP30939 366 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR10J1P30954 320 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ARRDC2Q8TBH0 407 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ISOC2Q96AB3 205 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TAS2R5Q9NYW4 299 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLC16A5O15375 505 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 DDTP30046 118 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 CHRNB4P30926 498 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 UBE2G2P60604 165 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLC10A6Q3KNW5 377 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ARSIQ5FYB1 569 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR14C36Q8NHC7 312 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 KHSRPQ92945 711 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 NXF5Q9H1B4 397 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLC35B3Q9H1N7 401 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 PCDHGA9Q9Y5G4 932 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 A8MVM7 634 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR10J4P0C629 311 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SNRPGP62308 76 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 PHLDA2Q53GA4 152 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR8G2PQ6IF36 304 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLC39A11Q8N1S5 342 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OIT3Q8WWZ8 545 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SPTSSAQ969W0 71 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 MYADMQ96S97 322 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ZDHHC4Q9NPG8 344 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 COL1A2P08123 1366 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 PREX1Q8TCU6 1659 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR4E1P0C645 316 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TEAD2Q15562 447 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SAMD7Q7Z3H4 446 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 CCDC190Q86UF4 302 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OR5L2Q8NGL0 311 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 CMTM2Q8TAZ6 248 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 GNPNAT1Q96EK6 184 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 BCO2Q9BYV7 579 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 GLTPD2A6NH11 291 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 PLRG1O43660 514 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ACTL6BO94805 426 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 DTYMKP23919 212 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 HRH2P25021 359 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SEMA3BQ13214 749 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TREML2Q5T2D2 321 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 LRRTM4Q86VH4 590 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLC43A2Q8N370 569 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF485Q8NCK3 441 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 NIPSNAP1Q9BPW8 284 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ABHD16BQ9H3Z7 469 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 A6NLC8 198 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 GJE1A6NN92 205 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 FAM155AB1AL88 458 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 M0R2Z0 102 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TSPAN6O43657 245 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 HSBP1O75506 76 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ARG1P05089 322 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 GPR18Q14330 331 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ENTPD8Q5MY95 495 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 C11orf87Q6NUJ2 197 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF547Q8IVP9 402 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 FIBINQ8TAL6 211 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SECTM1Q8WVN6 248 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 MED17Q9NVC6 651 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SUSD2Q9UGT4 822 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 MUTYHQ9UIF7 546 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 PTPRUQ92729 1446 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 FZD9O00144 591 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 EPXP11678 715 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 OTX2P32243 289 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TMEM244Q5VVB8 128 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TGIF2LXQ8IUE1 241 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 TFGQ92734 400 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SLCO4A1Q96BD0 722 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 NTPCRQ9BSD7 190 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 SGPP1Q9BX95 441 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 MTIF3Q9H2K0 278 aaKnown RBP9.51□□□□□ -0.89
COL12A1-207ENST00000483888 DLL4Q9NR61 685 aa9.51□□□□□ -0.89
COL12A1-207ENST00000483888 RNF224P0DH78 156 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 ZNF728P0DKX0 622 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 HSD17B13Q7Z5P4 300 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-207ENST00000483888 SLC39A7Q92504 469 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 PTP4A1Q93096 173 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 AMBRA1Q9C0C7 1298 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 ST8SIA5O15466 376 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 TUSC2O75896 110 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 POLR2GP62487 172 aaKnown RBP eCLIP9.5□□□□□ -0.89
COL12A1-207ENST00000483888 NPY5RQ15761 445 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 YOD1Q5VVQ6 348 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-207ENST00000483888 DMRTA1Q5VZB9 504 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 OR51A4Q8NGJ6 313 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 CACNG4Q9UBN1 327 aa9.5□□□□□ -0.89
COL12A1-207ENST00000483888 SOX15O60248 233 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms