RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 CLDN22Q8N7P3 220 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 ANKK1Q8NFD2 765 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 OR4Q3Q8NH05 313 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 FANK1Q8TC84 345 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 ASB10Q8WXI3 467 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 MRPL13Q9BYD1 178 aaKnown RBP12.69□□□□□ -0.38
CCNL1-217ENST00000476367 INIPQ9NRY2 104 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 SLC7A10Q9NS82 523 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 CRIM1Q9NZV1 1036 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 UPB1Q9UBR1 384 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 ZNF346Q9UL40 294 aaKnown RBP12.69□□□□□ -0.38
CCNL1-217ENST00000476367 CDH10Q9Y6N8 788 aa12.69□□□□□ -0.38
CCNL1-217ENST00000476367 AKAP8O43823 692 aaKnown RBP12.68□□□□□ -0.38
CCNL1-217ENST00000476367 KRT33AO76009 404 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 NDUFB2O95178 105 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 CD14P08571 375 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 IGHV1-2P23083 117 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 IL32P24001 234 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 ERVK-25P63136 954 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 RIPK1Q13546 671 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 PARP8Q8N3A8 854 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 PIP4P2Q8N4L2 257 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 ATG16L2Q8NAA4 619 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 NMD3Q96D46 503 aaKnown RBP12.68□□□□□ -0.38
CCNL1-217ENST00000476367 ZNF837Q96EG3 531 aaPredicted RBP12.68□□□□□ -0.38
CCNL1-217ENST00000476367 ZC3HAV1LQ96H79 300 aaKnown RBP12.68□□□□□ -0.38
CCNL1-217ENST00000476367 Q96M85 177 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 MED18Q9BUE0 208 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 TXNIPQ9H3M7 391 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 KRCC1Q9NPI7 259 aaPredicted RBP12.68□□□□□ -0.38
CCNL1-217ENST00000476367 ASB6Q9NWX5 421 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 USE1Q9NZ43 259 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 MALT1Q9UDY8 824 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 RCE1Q9Y256 329 aa12.68□□□□□ -0.38
CCNL1-217ENST00000476367 SH3D21A4FU49 640 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 TXNDC12O95881 172 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 PGA4P0DJD7 388 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 OSMP13725 252 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 PSMB1P20618 241 aaKnown RBP12.67□□□□□ -0.38
CCNL1-217ENST00000476367 PEX19P40855 299 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 BIDP55957 195 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 ITGADQ13349 1161 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 DAG1Q14118 895 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 HIST3H3Q16695 136 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 MESTQ5EB52 335 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 CLEC12AQ5QGZ9 265 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 OGFRL1Q5TC84 451 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-217ENST00000476367 ACSM5Q6NUN0 579 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 PTCHD4Q6ZW05 846 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 OR6X1Q8NH79 312 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 HDAC2Q92769 488 aaKnown RBP12.67□□□□□ -0.38
CCNL1-217ENST00000476367 KISS1RQ969F8 398 aaPredicted RBP12.67□□□□□ -0.38
CCNL1-217ENST00000476367 RASD2Q96D21 266 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 DDOQ99489 341 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 ACTR6Q9GZN1 396 aa12.67□□□□□ -0.38
CCNL1-217ENST00000476367 IGKV1D-43A0A0B4J1Z2 117 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 SLC43A1O75387 559 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 UPK3AO75631 287 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 RAD51DO75771 328 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CNOT4O95628 575 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 PPP1R3DO95685 299 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 COX5AP20674 150 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 GSTM3P21266 225 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ARHGDIAP52565 204 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 RPL27P61353 136 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CDK5Q00535 292 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CAMK2DQ13557 499 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 P2RY6Q15077 328 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 LRRC36Q1X8D7 754 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 TMEM236Q5W0B7 351 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ALKBH2Q6NS38 261 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 LRFN4Q6PJG9 635 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 DPY19L2P2Q6ZN68 376 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 IQCF1Q8N6M8 205 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 POMGNT2Q8NAT1 580 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 S100PBPQ96BU1 408 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 KCNK17Q96T54 332 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 PAPOLBQ9NRJ5 636 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 NDRG3Q9UGV2 375 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 POFUT2Q9Y2G5 429 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 IER3IP1Q9Y5U9 82 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 HRNRQ86YZ3 2850 aaPredicted RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 RTTNQ86VV8 2226 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 A0A1W2PRG6 482 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CIB4A0PJX0 185 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ARPC3O15145 178 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 TRMUO75648 421 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ITGA5P08648 1049 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 APEHP13798 732 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CDH2P19022 906 aaPredicted RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 CDKN2AP42771 156 aaKnown RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 PCYT1AP49585 367 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 ALDH3A2P51648 485 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 TOP3AQ13472 1001 aaPredicted RBP12.66□□□□□ -0.38
CCNL1-217ENST00000476367 STK11Q15831 433 aa12.66□□□□□ -0.38
CCNL1-217ENST00000476367 C20orf196Q8IYI0 205 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms