RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 CPAMD8Q8IZJ3 1885 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 SLC19A2O60779 497 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 CD63P08962 238 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 RPS27P42677 84 aaKnown RBP13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 BLVRAP53004 296 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 OR10A3P58181 314 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 RPS11P62280 158 aaKnown RBP eCLIP13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 INSM1Q01101 510 aaPredicted RBP13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 TLE3Q04726 772 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 PRAMEF20Q5VT98 475 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 AGAP7PQ5VUJ5 663 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 SFXN4Q6P4A7 337 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 NDUFAF7Q7L592 441 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 OR4K17Q8NGC6 315 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 C5orf34Q96MH7 638 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 OR14A2Q96R54 314 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 PTGES2Q9H7Z7 377 aa13.83□□□□□ -0.2
RPUSD3-215ENST00000475470 TRAV1-2A0A0B4J238 106 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 SLC22A23A1A5C7 686 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 FAM25AB3EWG3 89 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 FAM25CB3EWG5 89 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 FAM25GB3EWG6 89 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 NPIPA5E9PKD4 350 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 PHYHO14832 338 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 EFNA2O43921 213 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 IGHEP01854 428 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 ALOX5APP20292 161 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 RAB3BP20337 219 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 EVX1P49640 407 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 NANOS3P60323 173 aaKnown RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 SNTA1Q13424 505 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 PLA2G2CQ5R387 149 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 LIPNQ5VXI9 398 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 RAB11FIP2Q7L804 512 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 SETD6Q8TBK2 473 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 POC1BQ8TC44 478 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 HAVCR2Q8TDQ0 301 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 KCTD12Q96CX2 325 aaKnown RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 FOXN4Q96NZ1 517 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 SMAD5Q99717 465 aaKnown RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 TTYH2Q9BSA4 534 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 TSPAN10Q9H1Z9 355 aaPredicted RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 CDCP1Q9H5V8 836 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 CHST11Q9NPF2 352 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 NPIPA1Q9UND3 350 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 ZNF281Q9Y2X9 895 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 A6NIZ1 184 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 ZNF593O00488 134 aaPredicted RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 UCHL1P09936 223 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 DAP3P51398 398 aaKnown RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 RAP1BP61224 184 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 RAP1AP62834 184 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 EGR3Q06889 387 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 MRPL28Q13084 256 aaKnown RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 METAP1DQ6UB28 335 aaPredicted RBP13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 MALT1Q9UDY8 824 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 TBC1D24Q9ULP9 559 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 RASD1Q9Y272 281 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 R4GN57 208 aa13.82□□□□□ -0.2
RPUSD3-215ENST00000475470 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 UPK3AO75631 287 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ZFPL1O95159 310 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 IFNGR1P15260 489 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 SPNP16150 400 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 CTLA4P16410 223 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 CRABP1P29762 137 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 SSR4P51571 173 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 SCN1BQ07699 218 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 IL18Q14116 193 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 C3orf33Q6P1S2 294 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 C6orf15Q6UXA7 325 aaPredicted RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 WDSUB1Q8N9V3 476 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 OR5M1Q8NGP8 315 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 OTOSQ8NHW6 89 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 RPS4Y2Q8TD47 263 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ALKBH4Q9NXW9 302 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 PISDQ9UG56 409 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ALPK2Q86TB3 2170 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 IGLV1-36A0A0B4J1U3 117 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 A0A1W2PQ09 198 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ZNF879B4DU55 563 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 JMJD7P0C870 316 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 TCN2P20062 427 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 APEX1P27695 318 aaKnown RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 POU3F1Q03052 451 aaPredicted RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 MYBPHQ13203 477 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 ETFDHQ16134 617 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 HSD17B12Q53GQ0 312 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 YIF1BQ5BJH7 314 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 CCBE1Q6UXH8 406 aaPredicted RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 RPS19BP1Q86WX3 136 aaKnown RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 CADM3Q8N126 398 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 HSD17B8Q92506 261 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 PHYHIPQ92561 330 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 RNF166Q96A37 237 aaPredicted RBP13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 TMEM185BQ9H7F4 350 aa13.81□□□□□ -0.2
RPUSD3-215ENST00000475470 KCNG2Q9UJ96 466 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms