RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 CIDEBQ9UHD4 219 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 CRLS1Q9UJA2 301 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 ZNF346Q9UL40 294 aaKnown RBP1.93□□□□□ -2.1
CALD1-216ENST00000473714 EMCNQ9ULC0 261 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 B9D1Q9UPM9 204 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 ERVW-1Q9UQF0 538 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 KLHDC2Q9Y2U9 406 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 MRPS18CQ9Y3D5 142 aaKnown RBP1.93□□□□□ -2.1
CALD1-216ENST00000473714 FBXO7Q9Y3I1 522 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 NAALAD2Q9Y3Q0 740 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 ALG6Q9Y672 507 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 ALPK2Q86TB3 2170 aa1.93□□□□□ -2.1
CALD1-216ENST00000473714 ARHGAP21Q5T5U3 1957 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 IGLV7-46A0A075B6I9 117 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TEX48A0A1B0GUV7 120 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 MEIOCA2RUB1 952 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RNF222A6NCQ9 220 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 HELTA6NFD8 242 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 MFSD2BA6NFX1 497 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 IFITM10A6NMD0 228 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 H0YC42 278 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 GOLGA8SH3BPF8 625 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TRAFD1O14545 582 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 LSM1O15116 133 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 ARPC3O15145 178 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 STX7O15400 261 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 GPRIN2O60269 458 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 LCMT2O60294 686 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZNF432O94892 652 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TDP2O95551 362 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TSPAN12O95859 305 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 PRB2P02812 416 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 UMODP07911 640 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 HNF1AP20823 631 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 IGFBP5P24593 272 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CCNCP24863 283 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 LMO2P25791 158 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 UCP1P25874 307 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 SAA4P35542 130 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ATP5C1P36542 298 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 CSKP41240 450 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 STK19P49842 368 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 TAF6P49848 677 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 PPT1P50897 306 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 MLF1P58340 268 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 SRPXP78539 464 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZP4Q12836 540 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RIGQ13278 110 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CUL2Q13617 745 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CRMP1Q14194 572 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TMEM187Q14656 261 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CHI3L2Q15782 390 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZSWIM7Q19AV6 140 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CLEC12BQ2HXU8 276 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZNF699Q32M78 642 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 MOGAT2Q3SYC2 334 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZFP69Q49AA0 526 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 FAM76BQ5HYJ3 339 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 KPRPQ5T749 579 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 REP15Q6BDI9 236 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 OR8G2PQ6IF36 304 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 FAM53AQ6NSI3 398 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 TRIM65Q6PJ69 517 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 WDR74Q6RFH5 385 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZNF562Q6V9R5 426 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 LANCL3Q6ZV70 420 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RUFY3Q7L099 469 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 APTXQ7Z2E3 356 aaKnown RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 CEACAM19Q7Z692 300 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RNF130Q86XS8 419 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RAB43Q86YS6 212 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TGIF2LXQ8IUE1 241 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 SLC22A9Q8IVM8 553 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZNF683Q8IZ20 524 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 MCOLN2Q8IZK6 566 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ZNF781Q8N8C0 355 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 ANKFN1Q8N957 763 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 BBOF1Q8ND07 529 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 BEST4Q8NFU0 473 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TRIM58Q8NG06 486 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CCL4L1Q8NHW4 92 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RFESDQ8TAC1 157 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TBCKQ8TEA7 893 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RNF139Q8WU17 664 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 PATE1Q8WXA2 126 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 DLX4Q92988 240 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 SLC25A36Q96CQ1 311 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 FAM218AQ96MZ4 157 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 AMDHD1Q96NU7 426 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 PSKH2Q96QS6 385 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 F2RL3Q96RI0 385 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 CCL19Q99731 98 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 C19orf43Q9BQ61 176 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 FAM173AQ9BQD7 235 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TRIM51Q9BSJ1 452 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TMEM43Q9BTV4 400 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 TSSK1BQ9BXA7 367 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RSPO3Q9BXY4 272 aaPredicted RBP1.92□□□□□ -2.1
CALD1-216ENST00000473714 COMMD4Q9H0A8 199 aa1.92□□□□□ -2.1
CALD1-216ENST00000473714 RHOJQ9H4E5 214 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms