RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 SNX32Q86XE0 403 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 TMEM255BQ8WV15 326 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 SIKE1Q9BRV8 207 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 TPK1Q9H3S4 243 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 ZNF442Q9H7R0 627 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 EVA1AQ9H8M9 152 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 NANSQ9NR45 359 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 C20orf141Q9NUB4 165 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 FZR1Q9UM11 496 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 FKBP7Q9Y680 259 aa14.39□□□□□ -0.11
USP40-212ENST00000473191 LRP5LA4QPB2 252 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 LYNX1G3V0Z9 82 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 MRASO14807 208 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 LYNX1P0DP58 116 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 NPR2P20594 1047 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 PAX7P23759 505 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 PPOXP50336 477 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 ARFIP2P53365 341 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 RAB1AP62820 205 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 MYBPC1Q00872 1141 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 GUCY1A3Q02108 690 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 ZP4Q12836 540 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 PIN1Q13526 163 aaPredicted RBP14.38□□□□□ -0.11
USP40-212ENST00000473191 CYLC2Q14093 348 aaPredicted RBP14.38□□□□□ -0.11
USP40-212ENST00000473191 RAB39AQ14964 217 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 DEF8Q6ZN54 512 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 IL17RELQ6ZVW7 336 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 CXXC5Q7LFL8 322 aaKnown RBP14.38□□□□□ -0.11
USP40-212ENST00000473191 SLC30A8Q8IWU4 369 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 OR6X1Q8NH79 312 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 SH3GL3Q99963 347 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 MRPL37Q9BZE1 423 aaKnown RBP14.38□□□□□ -0.11
USP40-212ENST00000473191 GLTPQ9NZD2 209 aa14.38□□□□□ -0.11
USP40-212ENST00000473191 MYEF2Q9P2K5 600 aaKnown RBP14.38□□□□□ -0.11
USP40-212ENST00000473191 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 PIP5K1CO60331 668 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 OR6A2O95222 327 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 F13BP05160 661 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 ADRA2AP08913 450 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 CSF3P09919 207 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 PGA4P0DJD7 388 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 PGA3P0DJD8 388 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 UMPSP11172 480 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 CCL2P13500 99 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 NR4A1P22736 598 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 IL2RGP31785 369 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 CHRFAM7AQ494W8 412 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 INTS11Q5TA45 600 aaKnown RBP14.37□□□□□ -0.11
USP40-212ENST00000473191 CYB5R2Q6BCY4 276 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 MEX3DQ86XN8 651 aaKnown RBP14.37□□□□□ -0.11
USP40-212ENST00000473191 PAQR4Q8N4S7 273 aaPredicted RBP14.37□□□□□ -0.11
USP40-212ENST00000473191 OR8J3Q8NGG0 315 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 C10orf82Q8WW14 230 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 MSI2Q96DH6 328 aaKnown RBP14.37□□□□□ -0.11
USP40-212ENST00000473191 ZNF347Q96SE7 839 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 KCNK17Q96T54 332 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 PIMREGQ9BSJ6 248 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 B3GAT2Q9NPZ5 323 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 ARMCX1Q9P291 453 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 ZNF229Q9UJW7 825 aa14.37□□□□□ -0.11
USP40-212ENST00000473191 STAMBPO95630 424 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 TCN1P20061 433 aaPredicted RBP14.36□□□□□ -0.11
USP40-212ENST00000473191 IGFBP5P24593 272 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 SEC24CP53992 1094 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 SRSF2Q01130 221 aaKnown RBP14.36□□□□□ -0.11
USP40-212ENST00000473191 RPL18Q07020 188 aaKnown RBP14.36□□□□□ -0.11
USP40-212ENST00000473191 MMEL1Q495T6 779 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 CCDC36Q8IYA8 594 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 SLC22A24Q8N4F4 322 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 POU5F2Q8N7G0 328 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 MOSPD2Q8NHP6 518 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 ZNF566Q969W8 418 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 SLC25A44Q96H78 314 aaPredicted RBP14.36□□□□□ -0.11
USP40-212ENST00000473191 SYT3Q9BQG1 590 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 CHODLQ9H9P2 273 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 TMEM38BQ9NVV0 291 aa14.36□□□□□ -0.11
USP40-212ENST00000473191 MALRD1Q5VYJ5 2156 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 IGKV1D-43A0A0B4J1Z2 117 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 LOC390937A0A1W2PQ73 354 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 MT-ND1P03886 318 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 VIMP08670 466 aaKnown RBP14.35□□□□□ -0.11
USP40-212ENST00000473191 QDPRP09417 244 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 TROVE2P10155 538 aaKnown RBP eCLIP14.35□□□□□ -0.11
USP40-212ENST00000473191 DAOP14920 347 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 AQP2P41181 271 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 ALDH3B1P43353 468 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 TAS2R41P59536 307 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 MAD2L1BPQ15013 274 aaPredicted RBP14.35□□□□□ -0.11
USP40-212ENST00000473191 TRIP10Q15642 601 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 FXNQ16595 210 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 LRRC23Q53EV4 343 aaPredicted RBP14.35□□□□□ -0.11
USP40-212ENST00000473191 SYT14Q8NB59 555 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 MCHR2Q969V1 340 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 MRPL24Q96A35 216 aaKnown RBP14.35□□□□□ -0.11
USP40-212ENST00000473191 MPP4Q96JB8 637 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 RAB1BQ9H0U4 201 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 MOV10Q9HCE1 1003 aaKnown RBP14.35□□□□□ -0.11
USP40-212ENST00000473191 RIMS3Q9UJD0 308 aa14.35□□□□□ -0.11
USP40-212ENST00000473191 SNX13Q9Y5W8 968 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms