RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 PEA15Q15121 130 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TBC1D28Q2M2D7 210 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR2B11Q5JQS5 317 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 AVPI1Q5T686 147 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 DOK3Q7L591 496 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PM20D2Q8IYS1 436 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 BORCS6Q96GS4 357 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 SMIM14Q96QK8 99 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ANKRD19PQ9H560 264 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ATP13A2Q9NQ11 1180 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 KCND3Q9UK17 655 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PRELID3BQ9Y3B1 194 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 CACNA1SQ13698 1873 aa12.28□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 UBE2KP61086 200 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ARFGAP1Q8N6T3 406 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR52D1Q9H346 318 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 IKZF5Q9H5V7 419 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PELI2Q9HAT8 420 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 GALR3O60755 368 aaPredicted RBP12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 MMP2P08253 660 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 PROZP22891 400 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TRHRP34981 398 aaPredicted RBP12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 FOXC1Q12948 553 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 TATDN3Q17R31 274 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 WDTC1Q8N5D0 677 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 OR1N1Q8NGS0 311 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ZNF597Q96LX8 424 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 NTMT1Q9BV86 223 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 QPCTLQ9NXS2 382 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 ASIC5Q9NY37 505 aa12.27□□□□□ -0.44
NPHP3-ACAD11-201ENST00000471702 HELTA6NFD8 242 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GFRA2O00451 464 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SRPX2O60687 465 aaPredicted RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CSF1P09603 554 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CA5AP35218 305 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PAGE3Q5JUK9 113 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MARCH8Q5T0T0 291 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NUP37Q8NFH4 326 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RAB3CQ96E17 227 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RIMS4Q9H426 269 aaPredicted RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CNTD2Q9H8S5 307 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GALNT9Q9HCQ5 603 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 AQP7P3A6NL99 342 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FDXRP22570 491 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 KCNAB1Q14722 419 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LTB4RQ15722 352 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FRMPD2BQ6IN97 320 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TIMM29Q9BSF4 260 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR11A1Q9GZK7 315 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GAPDHSO14556 408 aaPredicted RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GGT1P19440 569 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 HIST1H1TP22492 207 aaPredicted RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SNTB1Q13884 538 aaKnown RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 GALEQ14376 348 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CPEB2Q7Z5Q1 589 aaKnown RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 YRDCQ86U90 279 aaKnown RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PIGTQ969N2 578 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NRSN2Q9GZP1 204 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TAS2R16Q9NYV7 291 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SUB1P53999 127 aaKnown RBP eCLIP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 INHBCP55103 352 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 RAB15P59190 212 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TMEM65Q6PI78 240 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BTNL3Q6UXE8 466 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC35G3Q8N808 338 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR4A4PQ8NGN8 299 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 BRIX1Q8TDN6 353 aaKnown RBP12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TCFL5Q9UL49 500 aa12.27□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SPINT2O43291 252 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 EGFP01133 1207 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PSMB2P49721 201 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 LEXMQ3ZCV2 418 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 METAP1DQ6UB28 335 aaPredicted RBP12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PIANPQ8IYJ0 282 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLCO2A1Q92959 643 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 USP3Q9Y6I4 520 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 M0R1B8 84 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DEGS1O15121 323 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DEFB109BQ30KR1 87 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ABHD4Q8TB40 342 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PIGLQ9Y2B2 252 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NOTCH3Q9UM47 2321 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 COL6A6A6NMZ7 2263 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 PTGESO14684 152 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 OR8G1Q15617 311 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SYPL1Q16563 259 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NXNL2Q5VZ03 156 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 C18orf63Q68DL7 685 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 DGAT2L7PQ6IED9 249 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 TVP23CQ96ET8 276 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 SLC45A3Q96JT2 553 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 FGF21Q9NSA1 209 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 URGCP-MRPS24S4R325 110 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 NWD2Q9ULI1 1742 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 ZFP92A6NM28 416 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 KCNK2O95069 426 aa12.26□□□□□ -0.45
NPHP3-ACAD11-201ENST00000471702 CPMP14384 443 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms