RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 PRRG2O14669 202 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 TRAF3IP2O43734 574 aaPredicted RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 SLC16A7O60669 478 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 MRPL33O75394 65 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 KHDRBS3O75525 346 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 TRMUO75648 421 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 RAB36O95755 333 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 CLPTM1O96005 669 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 TPOP07202 933 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 DBTP11182 482 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 PIPP12273 146 aaPredicted RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 ATP6V1B1P15313 513 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 SPI1P17947 270 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 CSNK1A1P48729 337 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 LCN6P62502 163 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 GLO1Q04760 184 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 RAB40BQ12829 278 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 CAMK2DQ13557 499 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 THEM4Q5T1C6 240 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 ABLIM2Q6H8Q1 611 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 TMEM154Q6P9G4 183 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 BCDIN3DQ7Z5W3 292 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 GPR137CQ8N3F9 429 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 POMGNT2Q8NAT1 580 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 SYT14Q8NB59 555 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 NOXO1Q8NFA2 376 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 BBS1Q8NFJ9 593 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 OR5M9Q8NGP3 310 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 FNDC9Q8TBE3 224 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 RNF128Q8TEB7 428 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 ABHD3Q8WU67 409 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 TMEM80Q96HE8 168 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 CNN2Q99439 309 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 TEAD3Q99594 435 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 TUBA1CQ9BQE3 449 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 EMC6Q9BV81 110 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 MRPS26Q9BYN8 205 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 SRA1Q9HD15 236 aaKnown RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 PLSCR2Q9NRY7 297 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 VSX1Q9NZR4 365 aaPredicted RBP8.7□□□□□ -1.02
CCM2-204ENST00000470837 PSORS1C1Q9UIG5 152 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 ERGIC3Q9Y282 383 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 FKBP7Q9Y680 259 aa8.7□□□□□ -1.02
CCM2-204ENST00000470837 SLC22A23A1A5C7 686 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 OR6C68A6NDL8 312 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 EIF4E1BA6NMX2 242 aaKnown RBP8.69□□□□□ -1.02
CCM2-204ENST00000470837 ZNF724A8MTY0 619 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 RAMP1O60894 148 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 WDR1O75083 606 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GLCEO94923 617 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GYPBP06028 91 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 YES1P07947 543 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 HOXD4P09016 255 aaPredicted RBP8.69□□□□□ -1.02
CCM2-204ENST00000470837 DCKP27707 260 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GSTT1P30711 240 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ZNF84P51523 738 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 CASP6P55212 293 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 PER3P56645 1201 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ACTC1P68032 377 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ACTA1P68133 377 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ST3GAL4Q11206 333 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 OR2A2Q6IF42 318 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ZNF773Q6PK81 442 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GFRALQ6UXV0 394 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 PRSS48Q7RTY5 328 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ZNF100Q8IYN0 542 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 OR51G2Q8NGK0 314 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GGHQ92820 318 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 PTP4A1Q93096 173 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 TM9SF2Q99805 663 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ULBP2Q9BZM5 246 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 NUAK2Q9H093 628 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 RNF122Q9H9V4 155 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 CALHM2Q9HA72 323 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 GP6Q9HCN6 339 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 EXOSC1Q9Y3B2 195 aaKnown RBP8.69□□□□□ -1.02
CCM2-204ENST00000470837 EMC9Q9Y3B6 208 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 FLVCR1Q9Y5Y0 555 aa8.69□□□□□ -1.02
CCM2-204ENST00000470837 ANKRD11Q6UB99 2663 aaPredicted RBP8.69□□□□□ -1.02
CCM2-204ENST00000470837 ASPMQ8IZT6 3477 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 IGKV3D-15A0A087WSY6 115 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 ZNF716A6NP11 495 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 FAM171A2A8MVW0 826 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 MYL12BO14950 172 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 TMCC2O75069 709 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 AQP8O94778 261 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 CDK1P06493 297 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 STSP08842 583 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 PGA4P0DJD7 388 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 PGA3P0DJD8 388 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 CLUP10909 449 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 ZNF823P16415 610 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 KLK2P20151 261 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 PYCR1P32322 319 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 CDH15P55291 814 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 TUBA4AP68366 448 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 SLC35A2P78381 396 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 MVKQ03426 396 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 ST3GAL2Q16842 350 aa8.68□□□□□ -1.02
CCM2-204ENST00000470837 ZNF362Q5T0B9 420 aaPredicted RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms