RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 ZNF846Q147U1 533 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 CD226Q15762 336 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 BCL2A1Q16548 175 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 P4HA3Q7Z4N8 544 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 CDK20Q8IZL9 346 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 MEIOBQ8N635 442 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 OR52I1Q8NGK6 324 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 UCN2Q96RP3 112 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 PIGQQ9BRB3 760 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 HOXD1Q9GZZ0 328 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 UBQLN4Q9NRR5 601 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 MED31Q9Y3C7 131 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 F8P00451 2351 aa15.73■□□□□ 0.11
MRPL28-208ENST00000469744 A0A0B4J2E0 115 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 A0A1B0GX12 115 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SLC22A20A6NK97 555 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SCDO00767 359 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SURF4O15260 269 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ADRA2AP08913 450 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 GKN3PP0CG01 181 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 PLAURQ03405 335 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 C1DQ13901 141 aaKnown RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SPHARQ15513 63 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 MED22Q15528 200 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 PDZK1Q5T2W1 519 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 AADACL4Q5VUY2 407 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ADCK1Q86TW2 530 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF440Q8IYI8 595 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ANKK1Q8NFD2 765 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 OR2T33Q8NG76 320 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 OR4Q3Q8NH05 313 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 CNOT9Q92600 299 aaKnown RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 LRRC46Q96FV0 321 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF845Q96IR2 970 aaPredicted RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ZFP3Q96NJ6 502 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 OR5M11Q96RB7 305 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 ZNF426Q9BUY5 554 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SFXN3Q9BWM7 321 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 WDR12Q9GZL7 423 aaKnown RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 DCSTAMPQ9H295 470 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 SIAEQ9HAT2 523 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 DNAJB12Q9NXW2 375 aaKnown RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 JKAMPQ9P055 326 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 EXOSC1Q9Y3B2 195 aaKnown RBP15.72■□□□□ 0.11
MRPL28-208ENST00000469744 AKAP9Q99996 3911 aa15.72■□□□□ 0.11
MRPL28-208ENST00000469744 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 HTR3EA5X5Y0 456 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 CLDN25C9JDP6 229 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 PIP5K1CO60331 668 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 TNFSF13O75888 250 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 OPN1LWP04000 364 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 LCN1P31025 176 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 ACAA2P42765 397 aaKnown RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 GPR4P46093 362 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 MLLT11Q13015 90 aaPredicted RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 RPL3LQ92901 407 aaKnown RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 RBM24Q9BX46 236 aaKnown RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 SLIRPQ9GZT3 109 aaKnown RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 FN3KQ9H479 309 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 HMG20AQ9NP66 347 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 GALNT8Q9NY28 637 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 CCDC59Q9P031 241 aaKnown RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 ABCA4P78363 2273 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 MAP1AP78559 2803 aaPredicted RBP15.71■□□□□ 0.11
MRPL28-208ENST00000469744 HIVEP1P15822 2718 aa15.71■□□□□ 0.11
MRPL28-208ENST00000469744 A0A1W2PNV4 684 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 TMEM129A0AVI4 362 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 OIP5O43482 229 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 CTAG2O75638 210 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 IFI30P13284 250 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 LSM3P62310 102 aaKnown RBP15.71■□□□□ 0.1
MRPL28-208ENST00000469744 TMED1Q13445 227 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 TSTQ16762 297 aaKnown RBP15.71■□□□□ 0.1
MRPL28-208ENST00000469744 NDUFAF6Q330K2 333 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 LINC00114Q6XXX2 140 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 GGNQ86UU5 652 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 CNEP1R1Q8N9A8 125 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 OR52L1Q8NGH7 329 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 OR6Q1Q8NGQ2 317 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 LINC01560Q8TB33 94 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 FNDC9Q8TBE3 224 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 PHOSPHO1Q8TCT1 267 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 PLEKHA8Q96JA3 519 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 OPALINQ96PE5 141 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 JAM3Q9BX67 310 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 NXF2Q9GZY0 626 aaKnown RBP15.71■□□□□ 0.1
MRPL28-208ENST00000469744 MMP27Q9H306 513 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 TMEM185BQ9H7F4 350 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 AKIP1Q9NQ31 210 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 CHCHD3Q9NX63 227 aaKnown RBP15.71■□□□□ 0.1
MRPL28-208ENST00000469744 SEC14L4Q9UDX3 406 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 FOXD3Q9UJU5 478 aaPredicted RBP15.71■□□□□ 0.1
MRPL28-208ENST00000469744 BAIAP2Q9UQB8 552 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 SLC35A3Q9Y2D2 325 aa15.71■□□□□ 0.1
MRPL28-208ENST00000469744 A0A1B0GWA3 101 aa15.7■□□□□ 0.1
MRPL28-208ENST00000469744 TUBAL3A6NHL2 446 aa15.7■□□□□ 0.1
MRPL28-208ENST00000469744 EIF1AYO14602 144 aaKnown RBP15.7■□□□□ 0.1
MRPL28-208ENST00000469744 MYL12BO14950 172 aa15.7■□□□□ 0.1
MRPL28-208ENST00000469744 MYL12AP19105 171 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms