RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 FZD2Q14332 565 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 PSG5Q15238 335 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 RCN1Q15293 331 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 RFX4Q33E94 735 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 HSP90AB3PQ58FF7 597 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 LRRC10Q5BKY1 277 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CASC10Q5T4H9 136 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 AGBL2Q5U5Z8 902 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 FRMPD2BQ6IN97 320 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 TMEM107Q6UX40 140 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZYG11AQ6WRX3 759 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF621Q6ZSS3 439 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 NIPA1Q7RTP0 329 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CTAGE6Q86UF2 777 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 LHFPL3Q86UP9 236 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CDR2LQ86X02 465 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZADH2Q8N4Q0 377 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ARIH2OSQ8N7S6 290 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 OR4F15Q8NGB8 312 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 OR1N2Q8NGR9 330 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 PLPPR1Q8TBJ4 325 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 DTX3LQ8TDB6 740 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 GEMIN6Q8WXD5 167 aaKnown RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 FGF14Q92915 247 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 SGK3Q96BR1 496 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 DNAJC19Q96DA6 116 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 OR2M2Q96R28 347 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 PLIN2Q99541 437 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CCDC77Q9BR77 488 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 NUP58Q9BVL2 599 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 GPR61Q9BZJ8 451 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 EML4Q9HC35 981 aaKnown RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 MMP26Q9NRE1 261 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CCL28Q9NRJ3 127 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 INPP5EQ9NRR6 644 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 SAMSN1Q9NSI8 373 aaKnown RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 EXD2Q9NVH0 621 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 NMRK1Q9NWW6 199 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 PSMC3IPQ9P2W1 217 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 PCYOX1Q9UHG3 505 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNF223Q9UK11 482 aaPredicted RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 NUP50Q9UKX7 468 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 KIAA1257Q9ULG3 409 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 TRAPPC4Q9Y296 219 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 STARD10Q9Y365 291 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 GAKO14976 1311 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CDHR2Q9BYE9 1310 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 ZNFX1Q9P2E3 1918 aaKnown RBP1.32□□□□□ -2.2
CCDC93-205ENST00000466171 CDC42BPBQ9Y5S2 1711 aa1.32□□□□□ -2.2
CCDC93-205ENST00000466171 IGKV2-28A0A075B6P5 120 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 TRBV6-6A0A0A6YYG2 114 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 IGKV1D-13A0A0B4J2D9 117 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 A0A0U1RQS6 177 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 SPRR5A0A1B0GTR4 108 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 A0A1W2PPE3 182 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 SMCO3A2RU48 225 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 PRSS37A4D1T9 235 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 LRRIQ3A6PVS8 624 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 FAM166BA8MTA8 275 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 C11orf94C9JXX5 98 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 F6UB75 175 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 H3BNH8 94 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 TMX2-CTNND1H3BSU7 103 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 LAD1O00515 517 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 DYNC1I1O14576 645 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 AIM2O14862 343 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 SOX15O60248 233 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 HMMRO75330 724 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 IGKV2D-28P01615 120 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 FGF1P05230 155 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ANXA5P08758 320 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 PNMA6AP0CW24 399 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 IGKV1-13P0DP09 117 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 CALM1P0DP23 149 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 CALM2P0DP24 149 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 CALM3P0DP25 149 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 TROVE2P10155 538 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 TOP1P11387 765 aaKnown RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 CRISP2P16562 243 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 VHLP40337 213 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 GPR6P46095 362 aaPredicted RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 YAP1P46937 504 aaKnown RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 NPBWR2P48146 333 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 LHX2P50458 406 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 SUCLG1P53597 346 aaKnown RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 FBXW4P57775 412 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 YWHAGP61981 247 aaKnown RBP eCLIP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ACTA2P62736 377 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ACTG2P63267 376 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ACTC1P68032 377 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ACTA1P68133 377 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 MRPS22P82650 360 aaKnown RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 SMARCB1Q12824 385 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 MRPL23Q16540 153 aaKnown RBP1.31□□□□□ -2.2
CCDC93-205ENST00000466171 GUCA2BQ16661 112 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ZSCAN26Q16670 478 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 VPS26BQ4G0F5 336 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 ARMC12Q5T9G4 340 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 PRAMEF20Q5VT98 475 aa1.31□□□□□ -2.2
CCDC93-205ENST00000466171 CYB5R2Q6BCY4 276 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms