RNA–Protein interactions for RNA: ENST00000453056.5

VPS8-213, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-213ENST00000453056 IL1RAPQ9NPH3 570 aa13.57□□□□□ -0.24
VPS8-213ENST00000453056 GLTPQ9NZD2 209 aa13.57□□□□□ -0.24
VPS8-213ENST00000453056 POU2F3Q9UKI9 436 aa13.57□□□□□ -0.24
VPS8-213ENST00000453056 MED13LQ71F56 2210 aa13.57□□□□□ -0.24
VPS8-213ENST00000453056 TMCC2O75069 709 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 DIRAS1O95057 198 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 TSPAN19P0C672 248 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 CD53P19397 219 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 MAKP20794 623 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 CAPZA2P47755 286 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 RPS4XP62701 263 aaKnown RBP13.56□□□□□ -0.24
VPS8-213ENST00000453056 TOP3AQ13472 1001 aaPredicted RBP13.56□□□□□ -0.24
VPS8-213ENST00000453056 TRIM25Q14258 630 aaKnown RBP13.56□□□□□ -0.24
VPS8-213ENST00000453056 DEFB113Q30KQ7 82 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 ZNF672Q499Z4 452 aaPredicted RBP13.56□□□□□ -0.24
VPS8-213ENST00000453056 SLC22A25Q6T423 547 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 ZNF813Q6ZN06 617 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
VPS8-213ENST00000453056 ZDHHC21Q8IVQ6 265 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 ZNF611Q8N823 705 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 NOXO1Q8NFA2 376 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 OR13C2Q8NGS9 318 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 MOSPD2Q8NHP6 518 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 ASB10Q8WXI3 467 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 TMEM54Q969K7 222 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 LRGUKQ96M69 825 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 THTPAQ9BU02 230 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 FAIMQ9NVQ4 179 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 TAS2R1Q9NYW7 299 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 AURKCQ9UQB9 309 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 CELSR1Q9NYQ6 3014 aa13.56□□□□□ -0.24
VPS8-213ENST00000453056 TEP1Q99973 2627 aaKnown RBP13.55□□□□□ -0.24
VPS8-213ENST00000453056 TRAV27A0A087WT01 109 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 GYG2O15488 501 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 SMPD2O60906 423 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 GADD45GO95257 159 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 PGA4P0DJD7 388 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 PGA3P0DJD8 388 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 FUT4P22083 530 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
VPS8-213ENST00000453056 C3orf36Q3SXR2 165 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 PHYHD1Q5SRE7 291 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TBPL2Q6SJ96 375 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TMPRSS11FQ6ZWK6 438 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 MEX3DQ86XN8 651 aaKnown RBP13.55□□□□□ -0.24
VPS8-213ENST00000453056 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 OR52J3Q8NH60 311 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 OR51A7Q8NH64 312 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TMEM171Q8WVE6 324 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 ASB9Q96DX5 294 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 SLC38A2Q96QD8 506 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 FOXB1Q99853 325 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 C1QTNF6Q9BXI9 259 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TXNIPQ9H3M7 391 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 NELFAQ9H3P2 528 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 CXorf56Q9H5V9 222 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 MAGIXQ9H6Y5 334 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 TMCC3Q9ULS5 477 aa13.55□□□□□ -0.24
VPS8-213ENST00000453056 A6NIZ1 184 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 SHISA9B4DS77 424 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 SEC14L2O76054 403 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 IGHMP01871 453 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 B4GALT1P15291 398 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 ACADSP16219 412 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 RPL4P36578 427 aaKnown RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 IFNGR2P38484 337 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 ZNF84P51523 738 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 CTXN1P60606 82 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 RAP1BP61224 184 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 RAP1AP62834 184 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 TUBA1BP68363 451 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 TUBA4AP68366 448 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 CD47Q08722 323 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 FAM98BQ52LJ0 330 aaKnown RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 TUBA1AQ71U36 451 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 ZNF627Q7L945 461 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 PIWIL3Q7Z3Z3 882 aaKnown RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 FAM169BQ8N8A8 192 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 ZNF837Q96EG3 531 aaPredicted RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 FAM46AQ96IP4 442 aaKnown RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 SEPHS2Q99611 448 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 ALG12Q9BV10 488 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 CXXC4Q9H2H0 198 aa13.54□□□□□ -0.24
VPS8-213ENST00000453056 FLNAP21333 2647 aaKnown RBP13.54□□□□□ -0.24
VPS8-213ENST00000453056 SH3PXD2BA1X283 911 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 DHHO43323 396 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 TRMUO75648 421 aaKnown RBP13.53□□□□□ -0.24
VPS8-213ENST00000453056 KRT36O76013 467 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
VPS8-213ENST00000453056 RRM2P31350 389 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 ARR3P36575 388 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 RPL27P61353 136 aaKnown RBP13.53□□□□□ -0.24
VPS8-213ENST00000453056 CHRNB3Q05901 458 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 TESK1Q15569 626 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 ZBED5Q49AG3 693 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 IQCCQ4KMZ1 466 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 ARMC4Q5T2S8 1044 aa13.53□□□□□ -0.24
VPS8-213ENST00000453056 SPNS3Q6ZMD2 512 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms