RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-238	ENST00000449544	ZNF19	P17023	458 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	GABRR1	P24046	479 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	MYL9	P24844	172 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	EDNRA	P25101	427 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	PDLIM4	P50479	330 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	KPNB1	Q14974	876 aa	Known RBP	7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	ATAD3C	Q5T2N8	411 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	THSD4	Q6ZMP0	1018 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	APCDD1L	Q8NCL9	501 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	OR4F15	Q8NGB8	312 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	SGCD	Q92629	289 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	TAAR3P	Q9P1P4	343 aa		7.59	□□□□□ -1.19
HCG18-238	ENST00000449544	MPZL2	O60487	215 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	HOXB9	P17482	250 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	DPPA2	Q7Z7J5	298 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MKX	Q8IYA7	352 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	LILRB4	Q8NHJ6	448 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MFSD8	Q8NHS3	518 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF418	Q8TF45	676 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MS4A7	Q9GZW8	240 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	SYT4	Q9H2B2	425 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF703	Q9H7S9	590 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	SMURF1	Q9HCE7	757 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544		A0A075B6Q4	140 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544		A0A0J9YW62	118 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	RGS5	O15539	181 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	CD14	P08571	375 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	RFPL3S	P0C7P2	107 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	EPX	P11678	715 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF44	P15621	663 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	EDDM3B	P56851	147 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	PSG6	Q00889	435 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ACSF3	Q4G176	576 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	BCL2L15	Q5TBC7	163 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	PLCXD3	Q63HM9	321 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MUC15	Q8N387	334 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	TCEANC	Q8N8B7	351 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	TMEM185A	Q8NFB2	350 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	TNFRSF13C	Q96RJ3	184 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	INTS14	Q96SY0	518 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ERVK-18	Q9QC07	812 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	CHD5	Q8TDI0	1954 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	TGFA	P01135	160 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	SOX18	P35713	384 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MNDA	P41218	407 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	OMP	P47874	163 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	HSPA13	P48723	471 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	GTF2A1	P52655	376 aa	Predicted RBP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MVK	Q03426	396 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MED22	Q15528	200 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	OR2Z1	Q8NG97	314 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	OR13C2	Q8NGS9	318 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MRI1	Q9BV20	369 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	CACNG6	Q9BXT2	260 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	SAP30L	Q9HAJ7	183 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	RAB9B	Q9NP90	201 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	B3GAT1	Q9P2W7	334 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544		A0A1W2PS29	197 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	NTN1	O95631	604 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	ARFRP1	Q13795	201 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	HES1	Q14469	280 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	KLHL22	Q53GT1	634 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	XKR7	Q5GH72	579 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MOB3C	Q70IA8	216 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	AKAP1	Q92667	903 aa	Known RBP eCLIP	7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	MYDGF	Q969H8	173 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	TPK1	Q9H3S4	243 aa		7.58	□□□□□ -1.2
HCG18-238	ENST00000449544	PDCD11	Q14690	1871 aa	Known RBP	7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	LOC100289279	A0A1B0GTE1	492 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	HMX2	A2RU54	273 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	ANKRD33B	A6NCL7	494 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	HMGN4	O00479	90 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	GATB	O75879	557 aa	Known RBP	7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	NEURL1	O76050	574 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	CT45A8	P0DMV1	189 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	CT45A9	P0DMV2	189 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	ZNF17	P17021	662 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	PYCR1	P32322	319 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	ACKR1	Q16570	336 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	CT45A2	Q5DJT8	189 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	PGBD2	Q6P3X8	592 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	IGFL3	Q6UXB1	125 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	FAM57B	Q71RH2	274 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	UCN2	Q96RP3	112 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	TUBB1	Q9H4B7	451 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	NMNAT1	Q9HAN9	279 aa	Predicted RBP	7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	KCNIP1	Q9NZI2	227 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	WASF3	Q9UPY6	502 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	MTOR	P42345	2549 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	KIAA1671	Q9BY89	1806 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	FAM230A	A0A1W2PPH8	454 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	FUOM	A2VDF0	154 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	TAF4	O00268	1085 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	TOR1A	O14656	332 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	SYT7	O43581	403 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	RGS9	O75916	674 aa	Predicted RBP	7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	RBM39	Q14498	530 aa	Known RBP	7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	BCL2A1	Q16548	175 aa		7.57	□□□□□ -1.2
HCG18-238	ENST00000449544	SAXO2	Q658L1	398 aa		7.57	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms