RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 AAED1Q7RTV5 226 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 WDFY1Q8IWB7 410 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 PTP4A1Q93096 173 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 WNT2BQ93097 391 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 ZNF582Q96NG8 517 aaPredicted RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 SNX18Q96RF0 628 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 KCNK17Q96T54 332 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 HCAR1Q9BXC0 346 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 SYT4Q9H2B2 425 aa17.35■□□□□ 0.37
SGCE-207ENST00000447873 RPRD1BQ9NQG5 326 aaKnown RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 VSX1Q9NZR4 365 aaPredicted RBP17.35■□□□□ 0.37
SGCE-207ENST00000447873 SH3D21A4FU49 640 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 CD8B2A6NJW9 211 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 ZNF724A8MTY0 619 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 AHCYL1O43865 530 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 SLC19A2O60779 497 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 YES1P07947 543 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 HOXD4P09016 255 aaPredicted RBP17.34■□□□□ 0.37
SGCE-207ENST00000447873 CLRN1P58418 232 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 C1orf185Q5T7R7 199 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 AADACL4Q5VUY2 407 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 UGT2A3Q6UWM9 527 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 GID4Q8IVV7 300 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 BBS1Q8NFJ9 593 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 BPIFB6Q8NFQ5 453 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 OR9Q1Q8NGQ5 310 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 RFKQ969G6 155 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 MRPL13Q9BYD1 178 aaKnown RBP17.34■□□□□ 0.37
SGCE-207ENST00000447873 OR51V1Q9H2C8 321 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 TP63Q9H3D4 680 aaPredicted RBP17.34■□□□□ 0.37
SGCE-207ENST00000447873 GP6Q9HCN6 339 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 GLRX2Q9NS18 164 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 RCE1Q9Y256 329 aa17.34■□□□□ 0.37
SGCE-207ENST00000447873 NOSIPQ9Y314 301 aaKnown RBP17.34■□□□□ 0.37
SGCE-207ENST00000447873 ARHGAP21Q5T5U3 1957 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 SLC22A23A1A5C7 686 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 PRODHO43272 600 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 PGA4P0DJD7 388 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 PGA3P0DJD8 388 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 SELENOPP49908 381 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 SLC25A1P53007 311 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 NUDT6P53370 316 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 CDH11P55287 796 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 KLHL12Q53G59 568 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 OR2A2Q6IF42 318 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 TMEM45BQ96B21 275 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 GMPPAQ96IJ6 420 aaPredicted RBP17.33■□□□□ 0.37
SGCE-207ENST00000447873 RBP7Q96R05 134 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 OR2M2Q96R28 347 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 TM9SF2Q99805 663 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 ALG12Q9BV10 488 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 NMNAT2Q9BZQ4 307 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 AMBNQ9NP70 447 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 PARPBPQ9NWS1 579 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.33■□□□□ 0.37
SGCE-207ENST00000447873 ZNF835Q9Y2P0 537 aa17.33■□□□□ 0.37
SGCE-207ENST00000447873 DOCK7Q96N67 2140 aa17.33■□□□□ 0.36
SGCE-207ENST00000447873 SLC1A7O00341 560 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 MRPL33O75394 65 aaKnown RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 SMNDC1O75940 238 aaKnown RBP eCLIP17.32■□□□□ 0.36
SGCE-207ENST00000447873 ZNF432O94892 652 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 GYPBP06028 91 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 CLUP10909 449 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 CHN2P52757 468 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 CXCR4P61073 352 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 RPS7P62081 194 aaKnown RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 CSNK2BP67870 215 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 DBPQ10586 325 aaPredicted RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 RTL6Q6ICC9 239 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 C9orf106Q8NAJ2 232 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 ST6GALNAC3Q8NDV1 305 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 NOXO1Q8NFA2 376 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 OR2T4Q8NH00 348 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 TSSK2Q96PF2 358 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 NR1H4Q96RI1 486 aaPredicted RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 NUAK2Q9H093 628 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 RERGLQ9H628 205 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 SRA1Q9HD15 236 aaKnown RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 ASB6Q9NWX5 421 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 SHANK1Q9Y566 2161 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 CENPBD1B2RD01 187 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 FAM20BO75063 409 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 SLC43A1O75387 559 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 NR2C1P13056 603 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 SPI1P17947 270 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 NTF4P34130 210 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 CSNK1A1P48729 337 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 LGALS3BPQ08380 585 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 APOFQ13790 326 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 RBM48Q5RL73 367 aaKnown RBP17.32■□□□□ 0.36
SGCE-207ENST00000447873 THEM4Q5T1C6 240 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 B3GNT6Q6ZMB0 384 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 DOLPP1Q86YN1 238 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 TMEM123Q8N131 208 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 OR6V1Q8N148 313 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 OR6N1Q8NGY5 312 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 FNDC8Q8TC99 324 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 SCN3BQ9NY72 215 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 MYRFQ9Y2G1 1151 aa17.32■□□□□ 0.36
SGCE-207ENST00000447873 RPL36Q9Y3U8 105 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms