RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 TMEM53Q6P2H8 277 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 UNQ6126/PRO20091Q6UXV3 157 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 C12orf54Q6X4T0 127 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 MAVSQ7Z434 540 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 ZCCHC24Q8N2G6 241 aaKnown RBP11.87□□□□□ -0.51
PTPRE-203ENST00000442830 C11orf65Q8NCR3 313 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 OR1J2Q8NGS2 313 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF418Q8TF45 676 aaPredicted RBP11.87□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF566Q969W8 418 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 TMEM186Q96B77 213 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 ZMYND19Q96E35 227 aaPredicted RBP11.87□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF75AQ96N20 296 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 EMC6Q9BV81 110 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 SLC19A3Q9BZV2 496 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 MED29Q9NX70 200 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 SLCO1C1Q9NYB5 712 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 SLC25A37Q9NYZ2 338 aa11.87□□□□□ -0.51
PTPRE-203ENST00000442830 STX18Q9P2W9 335 aaKnown RBP11.87□□□□□ -0.51
PTPRE-203ENST00000442830 TRAV20A0A0B4J274 112 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 CENPBD1B2RD01 187 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 HPRP00739 348 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 HIST1H2ABP04908 130 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 HLA-DOBP13765 273 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 ITGA2P17301 1181 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 GIPRP48546 466 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 CDH12P55289 794 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 PIGFQ07326 219 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 CCNIQ14094 377 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 TRIP10Q15642 601 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 NKPD1Q17RQ9 610 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 PHYHD1Q5SRE7 291 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 RGS7BPQ6MZT1 257 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-203ENST00000442830 RINLQ6ZS11 566 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 HIST3H2AQ7L7L0 130 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 RASSF5Q8WWW0 418 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 HIST1H2ACQ93077 130 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 RAB39BQ96DA2 213 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 SLC25A44Q96H78 314 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-203ENST00000442830 MPP4Q96JB8 637 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 SYT3Q9BQG1 590 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 BCL2L14Q9BZR8 327 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 RACGAP1Q9H0H5 632 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 NANSQ9NR45 359 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 NKIRAS2Q9NYR9 191 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 GLTPQ9NZD2 209 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 CCDC167Q9P0B6 97 aa11.86□□□□□ -0.51
PTPRE-203ENST00000442830 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.86□□□□□ -0.51
PTPRE-203ENST00000442830 TRBV5-3A0A0A0MS03 114 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SNAP29O95721 258 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 IGFBP1P08833 259 aaPredicted RBP11.85□□□□□ -0.51
PTPRE-203ENST00000442830 NR2C1P13056 603 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 RAD52P43351 418 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 BIDP55957 195 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 KLF3P57682 345 aaPredicted RBP11.85□□□□□ -0.51
PTPRE-203ENST00000442830 PLP2Q04941 152 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TBC1D28Q2M2D7 210 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SLC36A2Q495M3 483 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 GLIPR1L2Q4G1C9 344 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 INTS11Q5TA45 600 aaKnown RBP11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TMEM154Q6P9G4 183 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TTC33Q6PID6 262 aaPredicted RBP11.85□□□□□ -0.51
PTPRE-203ENST00000442830 NHLRC1Q6VVB1 395 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 USP43Q70EL4 1123 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SLC35D2Q76EJ3 337 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 C1orf174Q8IYL3 243 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SLC22A24Q8N4F4 322 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SLC30A7Q8NEW0 376 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 CLDND2Q8NHS1 167 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 LRRC8CQ8TDW0 803 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 STON2Q8WXE9 905 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TMEM54Q969K7 222 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TLCD1Q96CP7 247 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 TXNDC15Q96J42 360 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 MOGAT1Q96PD6 335 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 MCHR1Q99705 422 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 CDH20Q9HBT6 801 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 SLC52A3Q9NQ40 469 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF275Q9NSD4 429 aaPredicted RBP11.85□□□□□ -0.51
PTPRE-203ENST00000442830 HIF1ANQ9NWT6 349 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 VAPAQ9P0L0 249 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 DUSP13Q9UII6 198 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF229Q9UJW7 825 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 WNK2Q9Y3S1 2297 aa11.85□□□□□ -0.51
PTPRE-203ENST00000442830 IQCMA0A1B0GVH7 501 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 GMNCA6NCL1 334 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 C11orf98E9PRG8 122 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 PPIHO43447 177 aaKnown RBP11.84□□□□□ -0.51
PTPRE-203ENST00000442830 RNF13O43567 381 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 TPST1O60507 370 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 MFN2O95140 757 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 IGHG1P01857 330 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 GAAP10253 952 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ALDH3B1P43353 468 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF84P51523 738 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 MYBPC1Q00872 1141 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 RAB39AQ14964 217 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 ZNF74Q16587 644 aa11.84□□□□□ -0.51
PTPRE-203ENST00000442830 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms