RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 IL20Q9NYY1 176 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 ALG5Q9Y673 324 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CACNA1DQ01668 2161 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM129A0AVI4 362 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 PAHP00439 452 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 MT-ND4P03905 459 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 GABRB1P18505 474 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CASP6P55212 293 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CLDN12P56749 244 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 EEF1A1P68104 462 aaKnown RBP10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 FAM199XQ6PEV8 388 aaPredicted RBP10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC41A2Q96JW4 573 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CCDC32Q9BV29 185 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 GSKIPQ9P0R6 139 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 UBQLN2Q9UHD9 624 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 MOKQ9UQ07 419 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 CUL9Q8IWT3 2517 aa10.56□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR6C76A6NM76 312 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 C4orf51C9J302 202 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 HRKO00198 91 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF593O00488 134 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 FABP7O15540 132 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR2J2O76002 312 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 IGHEP01854 428 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CSTBP04080 98 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 FRKP42685 505 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PSG6Q00889 435 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 EXT1Q16394 746 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CARFQ8N187 725 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SIRT6Q8N6T7 355 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 TMEM99Q8N816 258 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF417Q8TAU3 575 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 BRIX1Q8TDN6 353 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF587Q96SQ5 575 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 C20orf141Q9NUB4 165 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 FKBP14Q9NWM8 211 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CHRNA9Q9UGM1 479 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PILRAQ9UKJ1 303 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 V9GYH0 126 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 NOTCH4Q99466 2003 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SURF4O15260 269 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 FOXS1O43638 330 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 IGHG1P01857 330 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PGAM2P15259 253 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CSNK2A1P68400 391 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CAMK2DQ13557 499 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 RPL22L1Q6P5R6 122 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SLC43A2Q8N370 569 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ESX1Q8N693 406 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SNIP1Q8TAD8 396 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SEMA4CQ9C0C4 833 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF160Q9HCG1 818 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 RBM7Q9Y580 266 aaKnown RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ACOD1A6NK06 481 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PATE3B3GLJ2 98 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR3A3P47888 321 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR3A2P47893 321 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CSNK1A1P48729 337 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 LIMK1P53667 647 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 STARD6P59095 220 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 NIPAL3Q6P499 406 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 KCTD20Q7Z5Y7 419 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 BPHLQ86WA6 291 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PM20D2Q8IYS1 436 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 GDPD1Q8N9F7 314 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 HAVCR2Q8TDQ0 301 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 TM4SF19Q96DZ7 209 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 OPALINQ96PE5 141 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 RABL2BQ9UNT1 228 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 A3GALT2U3KPV4 340 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 DCDC2BA2VCK2 349 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ERVH48-1M5A8F1 160 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 MT-ATP6P00846 226 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ABCD3P28288 659 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SHC1P29353 583 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 PLP2Q04941 152 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 C12orf73Q69YU5 71 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ALKAL2Q6UX46 152 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 TSSK2Q96PF2 358 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 SNX18Q96RF0 628 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 CCNL2Q96S94 520 aaPredicted RBP10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 ATG5Q9H1Y0 275 aa10.55□□□□□ -0.72
TRAPPC9-202ENST00000438773 A0A1B0GTQ1 180 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 F5H5K5 113 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 GPRIN2O60269 458 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SELENOFO60613 162 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 TP53P04637 393 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 MSX1P28360 303 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 BIDP55957 195 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 FCN2Q15485 313 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 PWWP2BQ6NUJ5 590 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 C16orf47Q6ZP98 133 aaPredicted RBP10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 LINC00696Q6ZRV3 163 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 RFPL4BQ6ZWI9 263 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZAR1Q86SH2 424 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 ZNF100Q8IYN0 542 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 OR5M1Q8NGP8 315 aa10.54□□□□□ -0.72
TRAPPC9-202ENST00000438773 C10orf90Q96M02 699 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms