RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 SOX15O60248 233 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 FGGP02679 453 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 HPGDP15428 266 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF17P17021 662 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF24P17028 368 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CTRLP40313 264 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 NPBWR2P48146 333 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ACLYP53396 1101 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SUB1P53999 127 aaKnown RBP eCLIP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MRPS22P82650 360 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 GPNMBQ14956 572 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MPPED2Q15777 294 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 LRRC10Q5BKY1 277 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 CARD17Q5XLA6 110 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 IGFL2Q6UWQ7 119 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ACP7Q6ZNF0 438 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SLC25A48Q6ZT89 311 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MKXQ8IYA7 352 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SDR42E1Q8WUS8 393 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 MYDGFQ969H8 173 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SH3GL1Q99961 368 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 DEFB127Q9H1M4 99 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 NXF3Q9H4D5 531 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 ANKRA2Q9H9E1 313 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 EML4Q9HC35 981 aaKnown RBP2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 EXD2Q9NVH0 621 aa2.42□□□□□ -2.02
TRAPPC13-204ENST00000438419 SETD1AO15047 1707 aaKnown RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CEP164Q9UPV0 1460 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 MEGF6O75095 1541 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 A0A0G2JN53 185 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 SMCO2A6NFE2 343 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 C9JVG2 144 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 IGHV4-34P06331 123 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ANXA5P08758 320 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CSF3P09919 207 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 GKN3PP0CG01 181 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCNE1P24864 410 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 NUDT1P36639 197 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 GPR6P46095 362 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 RORCP51449 518 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CDH6P55285 790 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 YWHAGP61981 247 aaKnown RBP eCLIP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 IRX3P78415 501 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ARHGAP19Q14CB8 494 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 RAET1LQ5VY80 246 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 METAP1DQ6UB28 335 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCDC73Q6ZRK6 1079 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 LHFPL3Q86UP9 236 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZADH2Q8N4Q0 377 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 FAM71E2Q8N5Q1 922 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 EID2Q8N6I1 236 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR4F15Q8NGB8 312 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 OR1N2Q8NGR9 330 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 GPR151Q8TDV0 419 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 KIFAP3Q92845 792 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CCDC126Q96EE4 140 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 TSNARE1Q96NA8 513 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 NRTNQ99748 197 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ATP5SQ99766 215 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ANP32EQ9BTT0 268 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ILKAPQ9H0C8 392 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 DEC1Q9P2X7 70 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ZNF225Q9UK10 706 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 NEU3Q9UQ49 428 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 HEBP2Q9Y5Z4 205 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 NSD2O96028 1365 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 TET2Q6N021 2002 aaPredicted RBP2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 ABCC10Q5T3U5 1492 aa2.41□□□□□ -2.02
TRAPPC13-204ENST00000438419 CLASP1Q7Z460 1538 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 LTBP1Q14766 1721 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 A0A075B6Q4 140 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 IGKV1D-13A0A0B4J2D9 117 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 A0A1B0GUA9 196 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 A6NDX4 124 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 KRTAP4-16G5E9R7 235 aaPredicted RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 RAB29O14966 203 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR2J3O76001 311 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 AGTP01019 485 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 FTH1P02794 183 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 IGKV1-13P0DP09 117 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 CNR1P21554 472 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 CCNCP24863 283 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC26A3P40879 764 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 SYKP43405 635 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 PRRX1P54821 245 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 GPX6P59796 221 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 ECH1Q13011 328 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 IDI1Q13907 227 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 FZD2Q14332 565 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 MRPL23Q16540 153 aaKnown RBP2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 RFX4Q33E94 735 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 ALKBH6Q3KRA9 238 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZBED5Q49AG3 693 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 LRRC66Q68CR7 880 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 FRMPD2BQ6IN97 320 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 SASS6Q6UVJ0 657 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 MS4A15Q8N5U1 240 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 Q8N9W7 124 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 VN1R2Q8NFZ6 395 aa2.4□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR1S2Q8NGQ3 325 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms