RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ZNF554Q86TJ5 538 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CDC20BQ86Y33 519 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CADM3Q8N126 398 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 RNF138Q8WVD3 245 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 C5orf34Q96MH7 638 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 AMELYQ99218 206 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 MED29Q9NX70 200 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ANKRD10Q9NXR5 420 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 KCNG2Q9UJ96 466 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TBC1D24Q9ULP9 559 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 RPH3AQ9Y2J0 694 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CACNA1HO95180 2353 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CNTRLQ7Z7A1 2325 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 A0A1W2PQ09 198 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SLC22A23A1A5C7 686 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ACOD1A6NK06 481 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 FAM25AB3EWG3 89 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 FAM25CB3EWG5 89 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 FAM25GB3EWG6 89 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 B4E171 279 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 BOLA2-SMG1P6H3BVE0 249 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CDX4O14627 284 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TRIM3O75382 744 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SERPINA3P01011 423 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 KRT8P05787 483 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CYC1P08574 325 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TACSTD2P09758 323 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF883P0CG24 379 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 PSKH1P11801 424 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 MSX1P28360 303 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 OTX2P32243 289 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TSPAN7P41732 249 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 EVX1P49640 407 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 POU3F1Q03052 451 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CD300CQ08708 224 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 IL18Q14116 193 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 P2RY14Q15391 338 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 EXT1Q16394 746 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 ODF4Q2M2E3 257 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 HBMQ6B0K9 141 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SFXN4Q6P4A7 337 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 MZT2AQ6P582 158 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 XKRXQ6PP77 449 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 C5orf46Q6UWT4 87 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 CCBE1Q6UXH8 406 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TIPARPQ7Z3E1 657 aaKnown RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 FAM220AQ7Z4H9 259 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 WDFY1Q8IWB7 410 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 UBE2J2Q8N2K1 259 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 OR4K17Q8NGC6 315 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 MFSD8Q8NHS3 518 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 POC1BQ8TC44 478 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 RNF166Q96A37 237 aaPredicted RBP9.36□□□□□ -0.91
HDAC9-210ENST00000428307 TXNDC15Q96J42 360 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 KLHL15Q96M94 604 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 EMC6Q9BV81 110 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 SP140LQ9H930 580 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 B3GAT2Q9NPZ5 323 aa9.36□□□□□ -0.91
HDAC9-210ENST00000428307 A0A1W2PNR3 127 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 TP53I11O14683 189 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 UPK3AO75631 287 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 MPZL1O95297 269 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 JMJD7P0C870 316 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 CD59P13987 128 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 ELK1P19419 428 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 RAB3BP20337 219 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 SFTPDP35247 375 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 FMODQ06828 376 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 MYBPHQ13203 477 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 TMEM156Q8N614 296 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 OR2M3Q8NG83 312 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 MRGPRX4Q96LA9 322 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 JSRP1Q96MG2 331 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 GNRHR2Q96P88 292 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NEURL2Q9BR09 285 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NOX4Q9NPH5 578 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 FRRS1LQ9P0K9 344 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 CLEC4AQ9UMR7 237 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 COA3Q9Y2R0 106 aaPredicted RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 AK6Q9Y3D8 172 aaKnown RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 FKBP7Q9Y680 259 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 A0A0B4J203 849 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 ANKRD33BA6NCL7 494 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 ANKRD61A6NGH8 418 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 LIPT2A6NK58 231 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NPIPA5E9PKD4 350 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 ZNF208O43345 1280 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 PTTG1O95997 202 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 APOA1P02647 267 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 SPARCP09486 303 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 CSF3P09919 207 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 CCL3P10147 92 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 CFL1P23528 166 aaKnown RBP9.35□□□□□ -0.91
HDAC9-210ENST00000428307 PLA2G2CQ5R387 149 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 OPN5Q6U736 354 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 LRRN1Q6UXK5 716 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NDUFAF7Q7L592 441 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 KCTD20Q7Z5Y7 419 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 NRARPQ7Z6K4 114 aa9.35□□□□□ -0.91
HDAC9-210ENST00000428307 TPRA1Q86W33 373 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms