RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 CD8B2A6NJW9 211 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 OR6C65A6NJZ3 312 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC22A31A6NKX4 558 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 KDM4EB2RXH2 506 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC1A7O00341 560 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNHIT1O43257 154 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 PRODHO43272 600 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC16A7O60669 478 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC19A2O60779 497 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ENTPD6O75354 484 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 KHDRBS3O75525 346 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 SMNDC1O75940 238 aaKnown RBP eCLIP7.47□□□□□ -1.214e-12■□□□□ 11.3
RBM39-208ENST00000416108 AQP8O94778 261 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 TNFAIP8O95379 198 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 TGM6O95932 706 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 IL2RAP01589 272 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 YES1P07947 543 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 GABRB1P18505 474 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ATP6V1E1P36543 226 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 CDKN2AP42771 156 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 GUCA1AP43080 201 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNF84P51523 738 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 CHN2P52757 468 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 BLVRAP53004 296 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC25A1P53007 311 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 NUDT6P53370 316 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 CXCR4P61073 352 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SIRPAP78324 504 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 TMED1Q13445 227 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 APOFQ13790 326 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SLC35D3Q5M8T2 416 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 C6orf141Q5SZD1 244 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 NSUN5P2Q63ZY6 315 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 RPTNQ6XPR3 784 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 B3GNT6Q6ZMB0 384 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 CCDC71Q8IV32 467 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 TUSC5Q8IXB3 177 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNF100Q8IYN0 542 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SYT14Q8NB59 555 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 NPEPL1Q8NDH3 523 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ST6GALNAC3Q8NDV1 305 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 PROKR2Q8NFJ6 384 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 OR9Q1Q8NGQ5 310 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 OR6K6Q8NGW6 343 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 UBE2FQ969M7 185 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 APH1AQ96BI3 265 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNF775Q96BV0 537 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNF582Q96NG8 517 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZFP3Q96NJ6 502 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 ZNF385AQ96PM9 386 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 YTHDF1Q9BYJ9 559 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 ULBP2Q9BZM5 246 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SYT4Q9H2B2 425 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 MED20Q9H944 212 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 BCO1Q9HAY6 547 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 SRA1Q9HD15 236 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 CCNB1IP1Q9NPC3 277 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 VSX1Q9NZR4 365 aaPredicted RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 UPB1Q9UBR1 384 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 AASSQ9UDR5 926 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 WARS2Q9UGM6 360 aaKnown RBP7.47□□□□□ -1.21
RBM39-208ENST00000416108 CLEC4AQ9UMR7 237 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 MOKQ9UQ07 419 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 FKBP7Q9Y680 259 aa7.47□□□□□ -1.21
RBM39-208ENST00000416108 TRGV8A0A0C4DH27 118 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SLC22A23A1A5C7 686 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 OR6C68A6NDL8 312 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 EFCAB10A6NFE3 127 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 WBP4O75554 376 aaKnown RBP7.46□□□□□ -1.22
RBM39-208ENST00000416108 WISP2O76076 250 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 GLCEO94923 617 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 HLA-DQA2P01906 255 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 CCDC159P0C7I6 412 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PGA4P0DJD7 388 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PGA3P0DJD8 388 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SPI1P17947 270 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 AGTR1P30556 359 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 HTR1FP30939 366 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SELENOPP49908 381 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 GABARAPL2P60520 117 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 POU4F2Q12837 409 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 KLHL22Q53GT1 634 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 SLC25A30Q5SVS4 291 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 THEM4Q5T1C6 240 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 AADACL4Q5VUY2 407 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 TMEM211Q6ICI0 200 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PCSK4Q6UW60 755 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 UGT2A3Q6UWM9 527 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 PLXDC2Q6UX71 529 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 AHSA2Q719I0 299 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 MEPCEQ7L2J0 689 aaKnown RBP7.46□□□□□ -1.22
RBM39-208ENST00000416108 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
RBM39-208ENST00000416108 FGD2Q7Z6J4 655 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 ADGRE4PQ86SQ3 457 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 STX19Q8N4C7 294 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 CNEP1R1Q8N9A8 125 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 ZNF540Q8NDQ6 660 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 OR10H5Q8NGA6 315 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 FBLIM1Q8WUP2 373 aa7.46□□□□□ -1.22
RBM39-208ENST00000416108 APH1BQ8WW43 257 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms