RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 BIDP55957 195 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 CARD18P57730 90 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 CXADRP78310 365 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 RUNX1T1Q06455 604 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 LGALS3BPQ08380 585 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 POU4F2Q12837 409 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 C1DQ13901 141 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 SLC17A1Q14916 467 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SLC10A1Q14973 349 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 PON3Q15166 354 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 INAQ16352 499 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 BCL2A1Q16548 175 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 LINC01590Q5TEZ4 76 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 EEF1A1P5Q5VTE0 462 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 FOXB2Q5VYV0 432 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 VASNQ6EMK4 673 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TMEM225Q6GV28 225 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 UNQ6494/PRO21346Q6UXR6 183 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZNF367Q7RTV3 350 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 GPR141Q7Z602 305 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZBTB46Q86UZ6 589 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SIAH3Q8IW03 269 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 PM20D2Q8IYS1 436 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR6V1Q8N148 313 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 MEIOBQ8N635 442 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 RBMXL3Q8N7X1 1067 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 POMGNT2Q8NAT1 580 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 PROKR2Q8NFJ6 384 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR4F15Q8NGB8 312 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR9K2Q8NGE7 335 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR51L1Q8NGJ5 315 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR13F1Q8NGS4 319 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR6K6Q8NGW6 343 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 OR2T4Q8NH00 348 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZNRF4Q8WWF5 429 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZCCHC14Q8WYQ9 949 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 RORBQ92753 470 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 EXTL1Q92935 676 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ABTB1Q969K4 478 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 TMIGD2Q96BF3 282 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZMYND19Q96E35 227 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 ABHD17AQ96GS6 310 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ZNF845Q96IR2 970 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 TXNDC15Q96J42 360 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TSSK2Q96PF2 358 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TAAR6Q96RI8 345 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 CNN2Q99439 309 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 TUBA1CQ9BQE3 449 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ALG12Q9BV10 488 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SF3B5Q9BWJ5 86 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 MND1Q9BWT6 205 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 NUAK2Q9H093 628 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 RACGAP1Q9H0H5 632 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 RBM38Q9H0Z9 239 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 DEFB127Q9H1M4 99 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TSPAN10Q9H1Z9 355 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 LDAHQ9H6V9 325 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TIGARQ9NQ88 270 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 SPRR3Q9UBC9 169 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TNFRSF10DQ9UBN6 386 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 MOKQ9UQ07 419 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 TP53TG5Q9Y2B4 290 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 LSM2Q9Y333 95 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 EXOSC1Q9Y3B2 195 aaKnown RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 FKBP7Q9Y680 259 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 IGF2RP11717 2491 aa5.93□□□□□ -1.46
VPS41-204ENST00000413141 ANKRD11Q6UB99 2663 aaPredicted RBP5.93□□□□□ -1.46
VPS41-204ENST00000413141 IGLV1-36A0A0B4J1U3 117 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 A0A1B0GVC2 190 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 TMEM129A0AVI4 362 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SLC35F4A4IF30 521 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ZNF716A6NP11 495 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 C12orf71A8MTZ7 269 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 FAM171A2A8MVW0 826 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 NPIPA2E9PIF3 369 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 NPIPA3F8WFD2 350 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 TAF4O00268 1085 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 AHCYL1O43865 530 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SELENOFO60613 162 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SLC16A7O60669 478 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 CYTIPO60759 359 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 IGHG1P01857 330 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 TFP02787 698 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SBK2P0C263 348 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 LIMS3P0CW19 117 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 LIMS4P0CW20 117 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 PGA4P0DJD7 388 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 PGA3P0DJD8 388 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 CTLA4P16410 223 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 PSMB9P28065 219 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 TTKP33981 857 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ATP6V1E1P36543 226 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 CD79BP40259 229 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 NAA10P41227 235 aaPredicted RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 ETV1P50549 477 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 CLDN17P56750 224 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 RPS3AP61247 264 aaKnown RBP5.92□□□□□ -1.46
VPS41-204ENST00000413141 ACTC1P68032 377 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 ACTA1P68133 377 aa5.92□□□□□ -1.46
VPS41-204ENST00000413141 SRYQ05066 204 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms