RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 TMEM54Q969K7 222 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CLPTM1LQ96KA5 538 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TNFRSF13CQ96RJ3 184 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF347Q96SE7 839 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PIP5K1AQ99755 562 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ANKRD19PQ9H560 264 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OBP2BQ9NPH6 170 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 BEX4Q9NWD9 120 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 POU2F3Q9UKI9 436 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MAGED1Q9Y5V3 778 aaPredicted RBP12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ARID1AO14497 2285 aa12.29□□□□□ -0.44
HLA-DQB1-202ENST00000399079 USF3Q68DE3 2245 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ARPC4-TTLL3A0A0A6YYG9 625 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IGHV1-18A0A0C4DH31 117 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 EFCAB9A8MZ26 197 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 E7EQL1 145 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SMPD2O60906 423 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 UBOX5O94941 541 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 DANCRP0C864 163 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CAPZA2P47755 286 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ADAM8P78325 824 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MYBPC1Q00872 1141 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MS4A2Q01362 244 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 B3GLCTQ6Y288 498 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF813Q6ZN06 617 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 OAFQ86UD1 273 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MYPOPQ86VE0 399 aaPredicted RBP12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HTRA1Q92743 480 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PERPQ96FX8 193 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FAM46AQ96IP4 442 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SEPHS2Q99611 448 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MRPL13Q9BYD1 178 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SEC61A2Q9H9S3 476 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ACTR3BQ9P1U1 418 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MOKQ9UQ07 419 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 MGAT4BQ9UQ53 548 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 POFUT2Q9Y2G5 429 aa12.28□□□□□ -0.44
HLA-DQB1-202ENST00000399079 PLCE1Q9P212 2302 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HTR3EA5X5Y0 456 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IGHG1P01857 330 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HLA-HP01893 362 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CELA3BP08861 270 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 QDPRP09417 244 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ACADSP16219 412 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ZNF26P17031 533 aaPredicted RBP12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ITGA2P17301 1181 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CLRN1P58418 232 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 NKX6-1P78426 367 aaPredicted RBP12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TOP3AQ13472 1001 aaPredicted RBP12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ARMC4Q5T2S8 1044 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TMPRSS11FQ6ZWK6 438 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 KRTAP1-3Q8IUG1 177 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CDK20Q8IZL9 346 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 ARHGAP24Q8N264 748 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CLDN22Q8N7P3 220 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 LRRC75AQ8NAA5 344 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 WFDC11Q8NEX6 87 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TMEM171Q8WVE6 324 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 CCDC124Q96CT7 223 aaKnown RBP12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 RADILQ96JH8 1075 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 DHRS1Q96LJ7 313 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 SLC38A2Q96QD8 506 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 FOXB1Q99853 325 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 TXNIPQ9H3M7 391 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 IL1RAPQ9NPH3 570 aa12.27□□□□□ -0.44
HLA-DQB1-202ENST00000399079 HEATR1Q9H583 2144 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ATP6V1G2-DDX39BF2Z307 99 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TRMUO75648 421 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IGKV3-15P01624 115 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FABP3P05413 133 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CECR9P0C854 216 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 HOXB1P14653 301 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DAP3P51398 398 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CTXN1P60606 82 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SPIBQ01892 262 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PIGFQ07326 219 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TRIM25Q14258 630 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 HIST3H3Q16695 136 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 C1QTNF12Q5T7M4 302 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF627Q7L945 461 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MDP1Q86V88 176 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DHFR2Q86XF0 187 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZDHHC21Q8IVQ6 265 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NOXO1Q8NFA2 376 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 OR4K5Q8NGD3 323 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 HDAC2Q92769 488 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MCHR2Q969V1 340 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MCUR1Q96AQ8 359 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FUZQ9BT04 418 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 THTPAQ9BU02 230 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 C1orf21Q9H246 121 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NOX3Q9HBY0 568 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF224Q9NZL3 707 aa12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CRNNQ9UBG3 495 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF346Q9UL40 294 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TCRBV5S2A0A599 114 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DHHO43323 396 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GADD45GO95257 159 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SLC2A10O95528 541 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms