RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 GABRA6Q16445 453 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 DUSP7Q16829 419 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 BEAN1Q3B7T3 259 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 MS4A18Q3C1V0 323 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PNCKQ6P2M8 343 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SHC4Q6S5L8 630 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 CYS1Q717R9 158 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 LHFPL3Q86UP9 236 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 C17orf64Q86WR6 236 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 GSPT2Q8IYD1 628 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ENTHD1Q8IYW4 607 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 METTL4Q8N3J2 472 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 JAGN1Q8N5M9 183 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 BAALCQ8WXS3 180 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 NXPE2Q96DL1 559 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ZFP3Q96NJ6 502 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 OR5B2Q96R09 309 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ATP5SQ99766 215 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 UTP23Q9BRU9 249 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SYT4Q9H2B2 425 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 CPVLQ9H3G5 476 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 AAMDCQ9H7C9 122 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ASCL3Q9NQ33 180 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 MAT2BQ9NZL9 334 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 MRPS28Q9Y2Q9 187 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 HYOU1Q9Y4L1 999 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 CDH10Q9Y6N8 788 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 V9GYY9 64 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ZSWIM8A7E2V4 1837 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SIRPB1O00241 398 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 TIMM23O14925 209 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 GSC2O15499 205 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PSTPIP1O43586 416 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 IGHG3P01860 377 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 MMP1P03956 469 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 H1F0P07305 194 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 RNASE1P07998 156 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PSMC3P17980 439 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 IVDP26440 423 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 QARSP47897 775 aaKnown RBP5.92□□□□□ -1.46
SMCO1-201ENST00000397537 ALDH3B2P48448 385 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 RGS6P49758 472 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PAX2Q02962 417 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 POU6F1Q14863 301 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 CTF1Q16619 201 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 TMEM249Q2WGJ8 235 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 TNFAIP8L3Q5GJ75 292 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 NKAPLQ5M9Q1 402 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 WASHC2DQ5SRD0 308 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PLPP4Q5VZY2 271 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 STEAP1BQ6NZ63 245 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 TMEM25Q86YD3 366 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 LINC01561Q8N1V8 128 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 OR5M9Q8NGP3 310 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 CNIH3Q8TBE1 160 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 RNF133Q8WVZ7 376 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 TAMM41Q96BW9 452 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SERPINB12Q96P63 405 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 DCTN5Q9BTE1 182 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 DCUN1D5Q9BTE7 237 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SLC25A19Q9HC21 320 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 NTMQ9P121 344 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 GNPTGQ9UJJ9 305 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 WIF1Q9Y5W5 379 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 SPTBN4Q9H254 2564 aa5.92□□□□□ -1.46
SMCO1-201ENST00000397537 PRR23AA6NEV1 266 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 SMIM23A6NLE4 172 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 LINC00587B1AMM8 73 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 FAM25AB3EWG3 89 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 FAM25CB3EWG5 89 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 FAM25GB3EWG6 89 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 TMEM238C9JI98 176 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 CLDN34H7C241 214 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 KPNA4O00629 521 aaPredicted RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 TM9SF1O15321 606 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 KHDRBS3O75525 346 aaKnown RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 OR7A10O76100 309 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 TNFAIP8O95379 198 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 CD160O95971 181 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 PET100P0DJ07 73 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 RFX5P48382 616 aaPredicted RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 CX3CR1P49238 355 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 XKP51811 444 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 RPL26P61254 145 aaKnown RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 PITX1P78337 314 aaPredicted RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 ZXDAP98168 799 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 SRSF1Q07955 248 aaKnown RBP eCLIP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 CNTN1Q12860 1018 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 TPBGQ13641 420 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 LTB4RQ15722 352 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 RPEL1Q2QD12 228 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 LRRC37A5PQ49AS3 106 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 COX19Q49B96 90 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 PXDC1Q5TGL8 231 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 RAD9BQ6WBX8 426 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 LINC00336Q6ZUF6 198 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 ZNF589Q86UQ0 364 aaPredicted RBP5.91□□□□□ -1.46
SMCO1-201ENST00000397537 SLC35F2Q8IXU6 374 aa5.91□□□□□ -1.46
SMCO1-201ENST00000397537 CYP4Z2PQ8N1L4 340 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms