RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 SMNDC1O75940 238 aaKnown RBP eCLIP20.88■□□□□ 0.933e-7■■□□□ 12.7
TSPAN4-203ENST00000397397 HIST1H1CP16403 213 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 VHLP40337 213 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 CLRN1P58418 232 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 SLX4IPQ5VYV7 408 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 JAZF1Q86VZ6 243 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 OR4K13Q8NH42 304 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 PLSCR4Q9NRQ2 329 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 COQ3Q9NZJ6 369 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 RELNP78509 3460 aa20.88■□□□□ 0.93
TSPAN4-203ENST00000397397 DVL2O14641 736 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 CGAP01215 116 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 IGHV3-9P01782 118 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 HMGN1P05114 100 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PGA4P0DJD7 388 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PGA3P0DJD8 388 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 CSNK1A1P48729 337 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 KHDRBS1Q07666 443 aaKnown RBP eCLIP20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 LGALS3BPQ08380 585 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 TFAP2EQ6VUC0 442 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 LIX1LQ8IVB5 337 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 C20orf196Q8IYI0 205 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 SYT14Q8NB59 555 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 NOXO1Q8NFA2 376 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 OR52E2Q8NGJ4 325 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 OR6N1Q8NGY5 312 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 OPN3Q9H1Y3 402 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 SLCO5A1Q9H2Y9 848 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PIGMQ9H3S5 423 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 FAM118AQ9NWS6 357 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PRSS50Q9UI38 385 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 KLHL21Q9UJP4 597 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 H7C1C5 153 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 IFNGP01579 166 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 CDKN2AP42771 156 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 AQP4P55087 323 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 LCN6P62502 163 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 TSPO2Q5TGU0 170 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 LEG1Q6P5S2 330 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PTCHD4Q6ZW05 846 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 ADCK1Q86TW2 530 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 UBE2J2Q8N2K1 259 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 GPR137CQ8N3F9 429 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 ZNF555Q8NEP9 628 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 SDR9C7Q8NEX9 313 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 CYGBQ8WWM9 190 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 ASB5Q8WWX0 329 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 SLC38A2Q96QD8 506 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 KCNK17Q96T54 332 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 ALG12Q9BV10 488 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 MRPL13Q9BYD1 178 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 PRRG3Q9BZD7 231 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 TVP23BQ9NYZ1 205 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 UPB1Q9UBR1 384 aa20.87■□□□□ 0.93
TSPAN4-203ENST00000397397 ALPK2Q86TB3 2170 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 OR6C65A6NJZ3 312 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 RIIAD1A6NNX1 92 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 CENPBD1B2RD01 187 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 H0YJX3 145 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 UPK3AO75631 287 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 KRT33AO76009 404 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 SLC2A10O95528 541 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 CD8BP10966 210 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 CHRNB4P30926 498 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 CD47Q08722 323 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 C12orf73Q69YU5 71 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 DHRSXQ8N5I4 330 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 ZNF610Q8N9Z0 462 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 POMGNT2Q8NAT1 580 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 TMEM54Q969K7 222 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 PLEKHA8Q96JA3 519 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 HRASLS5Q96KN8 279 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 LRR1Q96L50 414 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 NMNAT3Q96T66 252 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 LINC00470Q9BZP3 86 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 CMC2Q9NRP2 79 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 SLC7A10Q9NS82 523 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 GLTPQ9NZD2 209 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 FOXD3Q9UJU5 478 aaPredicted RBP20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 GMPPBQ9Y5P6 360 aa20.86■□□□□ 0.93
TSPAN4-203ENST00000397397 UBR5O95071 2799 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 NCOA6Q14686 2063 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 LOC100130705A0A1B0GUX0 176 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 PRSS37A4D1T9 235 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 EEF1E1-BLOC1S5C9J1V9 151 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 E9PQ18 207 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 M0R3G1 203 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 SURF4O15260 269 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 EEF1E1O43324 174 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 RENP00797 406 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 SRSF1Q07955 248 aaKnown RBP eCLIP20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 SNAPC1Q16533 368 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 PHYHD1Q5SRE7 291 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 IZUMO2Q6UXV1 221 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 RELL2Q8NC24 303 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 SLC37A3Q8NCC5 494 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 RBP7Q96R05 134 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 B3GAT2Q9NPZ5 323 aa20.85■□□□□ 0.93
TSPAN4-203ENST00000397397 FREM1Q5H8C1 2179 aa20.84■□□□□ 0.93
TSPAN4-203ENST00000397397 SLC22A23A1A5C7 686 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms