RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 SPRR3Q9UBC9 169 aa11.71□□□□□ -0.54
VPS26A-203ENST00000395098 LSM2Q9Y333 95 aaKnown RBP11.71□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF407Q9C0G0 2248 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 IGKV1D-43A0A0B4J1Z2 117 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 LOC102725191A0A1B0GVB3 256 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 TRMUO75648 421 aaKnown RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SEC14L2O76054 403 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 RENP00797 406 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 IGHA1P01876 353 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 TFP02787 698 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SBK2P0C263 348 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 CTLA4P16410 223 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF24P17028 368 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF43P17038 809 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 C1DQ13901 141 aaKnown RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 EEF1A1P5Q5VTE0 462 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 OTPQ5XKR4 325 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 Q6ZS92 163 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 GPR141Q7Z602 305 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 LHFPL3Q86UP9 236 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF511Q8NB15 262 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF385AQ96PM9 386 aaKnown RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 RASD1Q9Y272 281 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 CEPT1Q9Y6K0 416 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 CACNA1GO43497 2377 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SLC35F4A4IF30 521 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 TFECO14948 347 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ZNHIT1O43257 154 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SELENOFO60613 162 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 GLCEO94923 617 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 PSMB9P28065 219 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 TMED1Q13445 227 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SLC17A1Q14916 467 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 SYT6Q5T7P8 510 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 VASNQ6EMK4 673 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 LRRC69Q6ZNQ3 347 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 ASB18Q6ZVZ8 466 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 RFLNBQ8N5W9 214 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 NANOGP1Q8N7R0 232 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 PROKR2Q8NFJ6 384 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 NAA50Q9GZZ1 169 aaKnown RBP11.7□□□□□ -0.54
VPS26A-203ENST00000395098 LDAHQ9H6V9 325 aa11.7□□□□□ -0.54
VPS26A-203ENST00000395098 TRGV5A0A0B4J1U4 118 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 C12orf71A8MTZ7 269 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 MKRN2OSH3BPM6 223 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 DNPH1O43598 174 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 SLC16A7O60669 478 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 CAMK2DQ13557 499 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 GGTLC2Q14390 218 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 SLC35D3Q5M8T2 416 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 RNLSQ5VYX0 342 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 CREB3L2Q70SY1 520 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ZIC4Q8N9L1 334 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 OR9K2Q8NGE7 335 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF775Q96BV0 537 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-203ENST00000395098 SNX18Q96RF0 628 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 TIMP4Q99727 224 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 TUBA1CQ9BQE3 449 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 MRPL13Q9BYD1 178 aaKnown RBP11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ERVK13-1Q9NX77 482 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 LUZP4Q9P127 313 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 B9D1Q9UPM9 204 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ATMQ13315 3056 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 PTPRQQ9UMZ3 2332 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 IGLV1-36A0A0B4J1U3 117 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 IRGMA1A4Y4 181 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 TVP23AA6NH52 213 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 A6NIZ1 184 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 M0R3G1 203 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 CLDN17P56750 224 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 TMPRSS3P57727 454 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 RAP1BP61224 184 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 RAP1AP62834 184 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 LGALS3BPQ08380 585 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 MED22Q15528 200 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 CARD17Q5XLA6 110 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ZBTB46Q86UZ6 589 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 OR10H4Q8NGA5 316 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 OR2T4Q8NH00 348 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 C9orf43Q8TAL5 461 aaPredicted RBP11.69□□□□□ -0.54
VPS26A-203ENST00000395098 EXO5Q9H790 373 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 ERGIC3Q9Y282 383 aa11.69□□□□□ -0.54
VPS26A-203ENST00000395098 CACNA1AO00555 2505 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 ZNF716A6NP11 495 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 PGA4P0DJD7 388 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 PGA3P0DJD8 388 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 PSKH1P11801 424 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 MYL12AP19105 171 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 NTF4P34130 210 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 CXADRP78310 365 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 POU4F3Q15319 338 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 SSX6Q7RTT6 188 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 ZHX1-C8orf76Q96EF9 292 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 LHX6Q9UPM6 363 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 TP53TG5Q9Y2B4 290 aa11.68□□□□□ -0.54
VPS26A-203ENST00000395098 EXOSC1Q9Y3B2 195 aaKnown RBP11.68□□□□□ -0.54
VPS26A-203ENST00000395098 FKBP7Q9Y680 259 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms