RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 GRPEL2Q8TAA5 225 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 CDC6Q99741 560 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 DEFB127Q9H1M4 99 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 SLC6A15Q9H2J7 730 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 EMC7Q9NPA0 242 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 TAS2R8Q9NYW2 309 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 GLS2Q9UI32 602 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 OSGIN1Q9UJX0 560 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 FZD7O75084 574 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 IL7P13232 177 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 APOBEC1P41238 236 aaKnown RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 SSX6Q7RTT6 188 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 LAT2Q9GZY6 243 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 HIF3AQ9Y2N7 669 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 SCN2AQ99250 2005 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 TMEM265A0A087WTH1 108 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 SPI1P17947 270 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 OR5H2Q8NGV7 314 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 ZNF471Q9BX82 626 aaPredicted RBP16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 GABARAPL1Q9H0R8 117 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 TBCCD1Q9NVR7 557 aa16.4■□□□□ 0.22
PTPDC1-202ENST00000375360 KLRC4-KLRK1H3BQV0 150 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 MT-ND4P03905 459 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 TPOP07202 933 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 ABCD3P28288 659 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 FOXL2P58012 376 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 HSF1Q00613 529 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 Q499Y3 187 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 LRRC69Q6ZNQ3 347 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 NRARPQ7Z6K4 114 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 LRRC28Q86X40 367 aaPredicted RBP16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 PLCZ1Q86YW0 608 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 PLPP7Q8NBV4 271 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 OR1N1Q8NGS0 311 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 LGALS14Q8TCE9 139 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 MENTQ9BUN1 341 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 PRDM6Q9NQX0 595 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 CCDC88CQ9P219 2028 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 LILRB5O75023 590 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 NKX2-2O95096 273 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 MLC1Q15049 377 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 PWWP2BQ6NUJ5 590 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 SFXN4Q6P4A7 337 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 VHLLQ6RSH7 139 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 ARIH2OSQ8N7S6 290 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 RCE1Q9Y256 329 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 IGHV3-15A0A0B4J1V0 119 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 LOC102725191A0A1B0GVB3 256 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 CXADRP78310 365 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 GABREP78334 506 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 ALKBH1Q13686 389 aaKnown RBP16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 DNAJC5GQ8N7S2 189 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 OR51D1Q8NGF3 324 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 OR52N1Q8NH53 320 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM246Q9BRR3 403 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 C20orf141Q9NUB4 165 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 ARID2Q68CP9 1835 aa16.39■□□□□ 0.21
PTPDC1-202ENST00000375360 ZNF736B4DX44 427 aaPredicted RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 ARPC1BO15143 372 aaKnown RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 JUNBP17275 347 aaPredicted RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 UGT2B10P36537 528 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 ZIC1Q15915 447 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 MOB3CQ70IA8 216 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 OR2T35Q8NGX2 323 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 FGGYQ96C11 551 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 NECAB3Q96P71 396 aaPredicted RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 PAPOLGQ9BWT3 736 aaKnown RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 ACTR6Q9GZN1 396 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 REV1Q9UBZ9 1251 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM212A6NML5 194 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 PRICKLE4Q2TBC4 344 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 TPRA1Q86W33 373 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 TCEAL3Q969E4 200 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 CPNE5Q9HCH3 593 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 ASH2LQ9UBL3 628 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 GPX5O75715 221 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 PLCXD3Q63HM9 321 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 CBLN3Q6UW01 205 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 FAM83FQ8NEG4 500 aaPredicted RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 CACNG2Q9Y698 323 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 MIA3Q5JRA6 1907 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 CXCL13O43927 109 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 GCH1P30793 250 aa16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 VASH1Q7L8A9 365 aaPredicted RBP16.38■□□□□ 0.21
PTPDC1-202ENST00000375360 SOX18P35713 384 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 SEC61A1P61619 476 aaKnown RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ZNF628Q5EBL2 1059 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 FOXB2Q5VYV0 432 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 RNF165Q6ZSG1 346 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 CCDC36Q8IYA8 594 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 TMEM178AQ8NBL3 297 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 NRIP3Q9NQ35 241 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ABRACLQ9P1F3 81 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 FRG2CA6NGY1 282 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 ABHD16AO95870 558 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 SDHAP31040 664 aa16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 NOVA1P51513 510 aaKnown RBP16.37■□□□□ 0.21
PTPDC1-202ENST00000375360 DMRTC1Q5HYR2 192 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms