RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 CLDN17P56750 224 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 RPS7P62081 194 aaKnown RBP10.96□□□□□ -0.65
TUBE1-202ENST00000368662 ZNF91Q05481 1191 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 RAB40BQ12829 278 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 C3AR1Q16581 482 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 KLHL12Q53G59 568 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 DNM1P34Q6PK57 102 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 ADGRE4PQ86SQ3 457 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 TSPAN14Q8NG11 270 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 FNDC9Q8TBE3 224 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 WBP1Q96G27 269 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 RBP7Q96R05 134 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 COPS4Q9BT78 406 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 SYT4Q9H2B2 425 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 OR51V1Q9H2C8 321 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 AMBNQ9NP70 447 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 MRPS18AQ9NVS2 196 aaKnown RBP10.96□□□□□ -0.65
TUBE1-202ENST00000368662 HAO2Q9NYQ3 351 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 SCOCQ9UIL1 159 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 FLVCR1Q9Y5Y0 555 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 FKBP7Q9Y680 259 aa10.96□□□□□ -0.65
TUBE1-202ENST00000368662 A0A087WXM4 84 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 SLC22A23A1A5C7 686 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 SLC22A20A6NK97 555 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 TRMUO75648 421 aaKnown RBP10.96□□□□□ -0.66
TUBE1-202ENST00000368662 SPI1P17947 270 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 SLC2A5P22732 501 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 PTGS2P35354 604 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 PTGER4P35408 488 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 CLRN1P58418 232 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 POU4F2Q12837 409 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 APOFQ13790 326 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 THEM4Q5T1C6 240 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 C19orf48Q6RUI8 117 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 MCEMP1Q8IX19 187 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 BBS1Q8NFJ9 593 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 OR9Q1Q8NGQ5 310 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 ABHD3Q8WU67 409 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 GGHQ92820 318 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 INTS12Q96CB8 462 aaKnown RBP10.96□□□□□ -0.66
TUBE1-202ENST00000368662 TEAD3Q99594 435 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 SLX1AQ9BQ83 275 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 EMC6Q9BV81 110 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 HCAR1Q9BXC0 346 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 MRPL13Q9BYD1 178 aaKnown RBP10.96□□□□□ -0.66
TUBE1-202ENST00000368662 MED20Q9H944 212 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 GLRX2Q9NS18 164 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 FKBP14Q9NWM8 211 aa10.96□□□□□ -0.66
TUBE1-202ENST00000368662 ITPR1Q14643 2758 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 ZNF724A8MTY0 619 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 RGS10O43665 173 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 PGA4P0DJD7 388 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 PGA3P0DJD8 388 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 GABRA1P14867 456 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 TDGF1P3P51864 188 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 BLVRAP53004 296 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 AHSA2Q719I0 299 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 ZBTB46Q86UZ6 589 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 NOXO1Q8NFA2 376 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 PROKR2Q8NFJ6 384 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 TMEM45BQ96B21 275 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 SNRNP40Q96DI7 357 aaKnown RBP10.95□□□□□ -0.66
TUBE1-202ENST00000368662 RNFT2Q96EX2 444 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 ZNF385AQ96PM9 386 aaKnown RBP10.95□□□□□ -0.66
TUBE1-202ENST00000368662 RACGAP1Q9H0H5 632 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 BCO1Q9HAY6 547 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 PARPBPQ9NWS1 579 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 ASB6Q9NWX5 421 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 ALPK2Q86TB3 2170 aa10.95□□□□□ -0.66
TUBE1-202ENST00000368662 H7C1C5 153 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 WDR1O75083 606 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 WISP2O76076 250 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 GLCEO94923 617 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 FADS2O95864 444 aaKnown RBP10.94□□□□□ -0.66
TUBE1-202ENST00000368662 ATP6V1E1P36543 226 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 LCN6P62502 163 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 TUBA4AP68366 448 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 RUNX1T1Q06455 604 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 ZNF773Q6PK81 442 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 PRSS48Q7RTY5 328 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 P4HA3Q7Z4N8 544 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 STX19Q8N4C7 294 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 ZIC4Q8N9L1 334 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 NUAK2Q9H093 628 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 CALHM2Q9HA72 323 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 SRA1Q9HD15 236 aaKnown RBP10.94□□□□□ -0.66
TUBE1-202ENST00000368662 PCDHGB1Q9Y5G3 927 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 SNX5Q9Y5X3 404 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 OR6C65A6NJZ3 312 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 FIGNL2A6NMB9 653 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 AQP8O94778 261 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 GYPBP06028 91 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 YES1P07947 543 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 HOXD4P09016 255 aaPredicted RBP10.94□□□□□ -0.66
TUBE1-202ENST00000368662 CLUP10909 449 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 DCKP27707 260 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 ST3GAL4Q11206 333 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 CAMK2DQ13557 499 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 GGTLC2Q14390 218 aa10.94□□□□□ -0.66
TUBE1-202ENST00000368662 HIST3H3Q16695 136 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms