RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 AKR1C8PQ5T2L2 129 aa17.04■□□□□ 0.32
CLIP2-202ENST00000361545 METAP1DQ6UB28 335 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-202ENST00000361545 C1orf210Q8IVY1 113 aa17.04■□□□□ 0.32
CLIP2-202ENST00000361545 TP53I13Q8NBR0 393 aaPredicted RBP17.04■□□□□ 0.32
CLIP2-202ENST00000361545 OR2I1PQ8NGU4 316 aa17.04■□□□□ 0.32
CLIP2-202ENST00000361545 LIPHQ8WWY8 451 aa17.04■□□□□ 0.32
CLIP2-202ENST00000361545 BRWD1Q9NSI6 2320 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 EDDM3BP56851 147 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 SF3A2Q15428 464 aaKnown RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 AGAP6Q5VW22 663 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 KANSL1Q7Z3B3 1105 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 ZNF808Q8N4W9 903 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 CADM4Q8NFZ8 388 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 NAA50Q9GZZ1 169 aaKnown RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 EMC7Q9NPA0 242 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 NUBP2Q9Y5Y2 271 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 UPK1AO00322 258 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 KLK10O43240 276 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 BLVRBP30043 206 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 TNFSF8P32971 234 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 TCTN3Q6NUS6 607 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 ABHD4Q8TB40 342 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 CCDC187A0A096LP49 1063 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 LILRA5A6NI73 299 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 RTL6Q6ICC9 239 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 BPIFB2Q8N4F0 458 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 OR56B1Q8NGI3 324 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 SDSLQ96GA7 329 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 CHST11Q9NPF2 352 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 RCE1Q9Y256 329 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 GAPDHSO14556 408 aaPredicted RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 MSR1P21757 451 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 SLX4IPQ5VYV7 408 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 DEFB124Q8NES8 71 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 UBE2FQ969M7 185 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 RAB3CQ96E17 227 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 DCLRE1CQ96SD1 692 aaKnown RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 WWTR1Q9GZV5 400 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 RGCCQ9H4X1 137 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 NRIP3Q9NQ35 241 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 CTSFQ9UBX1 484 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 OR52A1Q9UKL2 312 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 ENSAO43768 121 aaKnown RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 GLCEO94923 617 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 TAS2R19P59542 299 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 ALKBH1Q13686 389 aaKnown RBP17.03■□□□□ 0.32
CLIP2-202ENST00000361545 BORAQ6PGQ7 559 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 OR5AS1Q8N127 324 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 BATF2Q8N1L9 274 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 MRGPRX3Q96LB0 322 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 NIPAL2Q9H841 368 aa17.03■□□□□ 0.32
CLIP2-202ENST00000361545 ASCC3Q8N3C0 2202 aaKnown RBP17.02■□□□□ 0.32
CLIP2-202ENST00000361545 TMEM221A6NGB7 291 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 SHOXO15266 292 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 SGCEO43556 437 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 KLK8O60259 260 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 CLDN6P56747 220 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 FAM71CQ8NEG0 241 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 OR5M11Q96RB7 305 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 STK17BO94768 372 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 THBS1P07996 1170 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 APEHP13798 732 aaKnown RBP17.02■□□□□ 0.32
CLIP2-202ENST00000361545 CD300LGQ6UXG3 332 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 OR52I1Q8NGK6 324 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 SLC25A37Q9NYZ2 338 aa17.02■□□□□ 0.32
CLIP2-202ENST00000361545 CEBPZOSA8MTT3 80 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 PPM1DO15297 605 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 CXCL13O43927 109 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 IFNA17P01571 189 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 HOXB5P09067 269 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 RAB40ALP0C0E4 278 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 SRSF5Q13243 272 aaKnown RBP17.02■□□□□ 0.31
CLIP2-202ENST00000361545 UBE2NLQ5JXB2 153 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 FAM199XQ6PEV8 388 aaPredicted RBP17.02■□□□□ 0.31
CLIP2-202ENST00000361545 SLC46A3Q7Z3Q1 461 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 OR4D6Q8NGJ1 314 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 RAB40AQ8WXH6 277 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 NOX3Q9HBY0 568 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 CRLF2Q9HC73 371 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 PIGLQ9Y2B2 252 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 SMCHD1A6NHR9 2005 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 TRGV8A0A0C4DH27 118 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 D6RAR5 112 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 OLFM2O95897 454 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 RIPPLY1Q0D2K3 151 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 SARAFQ96BY9 339 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 TAAR9Q96RI9 348 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 C1QTNF3Q9BXJ4 246 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 CEPT1Q9Y6K0 416 aa17.02■□□□□ 0.31
CLIP2-202ENST00000361545 A0A1B0GTL3 188 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 H7C2Y5 167 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 QDPRP09417 244 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 HTR2AP28223 471 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 PIGAP37287 484 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 DHRS4L2Q6PKH6 230 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 SFTPA1Q8IWL2 248 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 S100PBPQ96BU1 408 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 DIMT1Q9UNQ2 313 aaKnown RBP17.01■□□□□ 0.31
CLIP2-202ENST00000361545 SURF4O15260 269 aa17.01■□□□□ 0.31
CLIP2-202ENST00000361545 FZD7O75084 574 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms