RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 AANATQ16613 207 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 C3orf38Q5JPI3 329 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PLA2G2CQ5R387 149 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZBTB37Q5TC79 503 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 NIPAL3Q6P499 406 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 IL20RBQ6UXL0 311 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RPTNQ6XPR3 784 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RAB11FIP2Q7L804 512 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SSX6Q7RTT6 188 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ATCAYQ86WG3 371 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LIX1LQ8IVB5 337 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RNF113BQ8IZP6 322 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LNX2Q8N448 690 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 NANOGP1Q8N7R0 232 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SYT14Q8NB59 555 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 OR10H4Q8NGA5 316 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 DNAJA4Q8WW22 397 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 KISS1RQ969F8 398 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZHX1-C8orf76Q96EF9 292 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 FRMD6Q96NE9 622 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 DCSTAMPQ9H295 470 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 DDX28Q9NUL7 540 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 KLRF1Q9NZS2 232 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 H2AFY2Q9P0M6 372 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LUZP4Q9P127 313 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF229Q9UJW7 825 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 HS3ST3B1Q9Y662 390 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PCSK5Q92824 1860 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PIEZO2Q9H5I5 2752 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SVILO95425 2214 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 A0A087WV48 116 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 TMEM72A0PK05 275 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 OR6C68A6NDL8 312 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CCDC182A6NF36 153 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RIIAD1A6NNX1 92 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LEUTXA8MZ59 168 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PRR23D1E9PI22 279 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 E9PI62 339 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LOC110117498-PIK3R3F6TDL0 507 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 H3BML4 177 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 H3BSH0 61 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 TFECO14948 347 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 TO15178 435 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SUSD5O60279 629 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CIDEAO60543 219 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PPM1BO75688 479 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 FABP1P07148 127 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CLEC2LP0C7M8 214 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PRR23D2P0DMB1 279 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PSKH1P11801 424 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 MYL12AP19105 171 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 TCN2P20062 427 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 AHCYP23526 432 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CXCR1P25024 350 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ERP29P30040 261 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PYCR1P32322 319 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SLC1A3P43003 542 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SERPINB10P48595 397 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CAV3P56539 151 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 NRG3P56975 720 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RPS25P62851 125 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 BIKQ13323 160 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PCOLCEQ15113 449 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF74Q16587 644 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LBHQ53QV2 105 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZMAT1Q5H9K5 638 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 THEM4Q5T1C6 240 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF468Q5VIY5 522 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 AGAP6Q5VW22 663 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 B3GNTL1Q67FW5 361 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 MZT2BQ6NZ67 158 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF367Q7RTV3 350 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 KLBQ86Z14 1044 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CMIPQ8IY22 773 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CYP4Z2PQ8N1L4 340 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 OR6K6Q8NGW6 343 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SPRYD4Q8WW59 207 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 GTF3AQ92664 365 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CCDC120Q96HB5 630 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 AGAP4Q96P64 663 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RASL10BQ96S79 203 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CMKLR1Q99788 373 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ZNF251Q9BRH9 671 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 TMED9Q9BVK6 235 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 DEFB126Q9BYW3 111 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 BCL2L14Q9BZR8 327 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SEMA4CQ9C0C4 833 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 LAT2Q9GZY6 243 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 PARD6AQ9NPB6 346 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 NANSQ9NR45 359 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 CMC2Q9NRP2 79 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 MYOTQ9UBF9 498 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 FBXL2Q9UKC9 423 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 MRTO4Q9UKD2 239 aaKnown RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 GRIP1Q9Y3R0 1128 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 KMT2EQ8IZD2 1858 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 RP1L1Q8IWN7 2480 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-202ENST00000359366 SPTBN4Q9H254 2564 aa4.6□□□□□ -1.67
ATXN3-202ENST00000359366 C9J4A7 227 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms