RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 SGCEO43556 437 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 TUBG1P23258 451 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 PCYT1AP49585 367 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CDH15P55291 814 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RUNX1T1Q06455 604 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RIPK1Q13546 671 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CCNIQ14094 377 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 KEAP1Q14145 624 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 TOMM34Q15785 309 aaPredicted RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 PGBD2Q6P3X8 592 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 NKAIN4Q8IVV8 208 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 CHERPQ8IWX8 916 aaKnown RBP8.22□□□□□ -1.09
UPF2-202ENST00000357604 TEX29Q8N6K0 151 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 FCGR1BQ92637 280 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RORBQ92753 470 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 MICU1Q9BPX6 476 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 SLC22A4Q9H015 551 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RAB1BQ9H0U4 201 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 NELFAQ9H3P2 528 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 TUBG2Q9NRH3 451 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 PCDHB10Q9UN67 800 aa8.22□□□□□ -1.09
UPF2-202ENST00000357604 RGS10O43665 173 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 ZNF468Q5VIY5 522 aaPredicted RBP8.21□□□□□ -1.09
UPF2-202ENST00000357604 AGAP6Q5VW22 663 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 CBLN3Q6UW01 205 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 TMPRSS11FQ6ZWK6 438 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 MEPCEQ7L2J0 689 aaKnown RBP8.21□□□□□ -1.09
UPF2-202ENST00000357604 KCTD20Q7Z5Y7 419 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 TIGD4Q8IY51 512 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 ZNF676Q8N7Q3 588 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 C1orf162Q8NEQ5 155 aaPredicted RBP8.21□□□□□ -1.09
UPF2-202ENST00000357604 OR9Q2Q8NGE9 314 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 ASB10Q8WXI3 467 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 UFD1Q92890 307 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 ZNF184Q99676 751 aaPredicted RBP8.21□□□□□ -1.09
UPF2-202ENST00000357604 YTHDF1Q9BYJ9 559 aaKnown RBP8.21□□□□□ -1.09
UPF2-202ENST00000357604 ACTR6Q9GZN1 396 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 TINAGQ9UJW2 476 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 TNFAIP8O95379 198 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 SOX6P35712 828 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 LYPD8Q6UX82 237 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 C3P1Q6ZMU1 363 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 WDR88Q6ZMY6 472 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 IGFN1Q86VF2 1251 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 TCEANCQ8N8B7 351 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 PSMF1Q92530 271 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 COQ10BQ9H8M1 238 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 UBTD1Q9HAC8 227 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 MAN2C1Q9NTJ4 1040 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 B3GAT1Q9P2W7 334 aa8.21□□□□□ -1.09
UPF2-202ENST00000357604 BRWD1Q9NSI6 2320 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 CLDN24A6NM45 220 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 AQP8O94778 261 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 MAP3K8P41279 467 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 AQP6Q13520 282 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 FAM71CQ8NEG0 241 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 FNDC9Q8TBE3 224 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 OPN3Q9H1Y3 402 aaPredicted RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 EXOSC4Q9NPD3 245 aaKnown RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 A0A0G2JMM0 328 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 A0A1W2PPB8 328 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 A0A1W2PRS3 328 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 LRRC3CA6NJW4 275 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 KIR3DP1A8MWS1 328 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 LYNP07948 512 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 APEHP13798 732 aaKnown RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 LHX2P50458 406 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 AGFG1P52594 562 aaKnown RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 CLDN18P56856 261 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 ARF1P84077 181 aaKnown RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 PLBD1Q6P4A8 553 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 HOXB13Q92826 284 aaPredicted RBP8.21□□□□□ -1.1
UPF2-202ENST00000357604 PKP2Q99959 881 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 MOB1AQ9H8S9 216 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 WDR76Q9H967 626 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 SLC6A13Q9NSD5 602 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 DEPPQ9NTK1 212 aa8.21□□□□□ -1.1
UPF2-202ENST00000357604 A0A0J9YW62 118 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 HSMCR30P0CW71 290 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 RAB35Q15286 201 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 ZNF718Q3SXZ3 478 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 TMEM171Q8WVE6 324 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 HPS1Q92902 700 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 GRIP1Q9Y3R0 1128 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 XRCC2O43543 280 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 GLCEO94923 617 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 CEACAM16Q2WEN9 425 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 ZAR1Q86SH2 424 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 LINC00470Q9BZP3 86 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 HDHD2Q9H0R4 259 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 GATBO75879 557 aaKnown RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 SRP9P49458 86 aaKnown RBP8.2□□□□□ -1.1
UPF2-202ENST00000357604 POU4F3Q15319 338 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 HS3ST5Q8IZT8 346 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 PIK3IP1Q96FE7 263 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 SIAEQ9HAT2 523 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 SLC25A19Q9HC21 320 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 RASSF1Q9NS23 344 aa8.2□□□□□ -1.1
UPF2-202ENST00000357604 SPRR3Q9UBC9 169 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms