RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CD79AP11912 226 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 PIPP12273 146 aaPredicted RBP7.43□□□□□ -1.22
UBE4B-202ENST00000343090 SOX18P35713 384 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 TDGQ13569 410 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 KDM8Q8N371 416 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 KCTD12Q96CX2 325 aaKnown RBP7.43□□□□□ -1.22
UBE4B-202ENST00000343090 C14orf79Q96F83 325 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 TCTN2Q96GX1 697 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 Q96M85 177 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 MRI1Q9BV20 369 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 CCDC86Q9H6F5 360 aaKnown RBP7.43□□□□□ -1.22
UBE4B-202ENST00000343090 CHST2Q9Y4C5 530 aa7.43□□□□□ -1.22
UBE4B-202ENST00000343090 ZAR1LA6NP61 321 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 HRO43593 1189 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 BRINP1O60477 761 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 UBL3O95164 117 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RPS15P62841 145 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TCTN3Q6NUS6 607 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 FAHD1Q6P587 224 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RTL10Q7L3V2 364 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SLC16A13Q7RTY0 426 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 MARCH3Q86UD3 253 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 IL21Q9HBE4 155 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ENY2Q9NPA8 101 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 HINT3Q9NQE9 182 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 FER1L6Q2WGJ9 1857 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RPS10-NUDT3A0A1W2PQS6 291 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 M0QYG6 137 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 PPM1DO15297 605 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 GPRIN2O60269 458 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 DBHP09172 617 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RAB40ALP0C0E4 278 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ANXA7P20073 488 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 THBS2P35442 1172 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TNFRSF4P43489 277 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RPS10P46783 165 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TAS2R19P59542 299 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 OTPQ5XKR4 325 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ZNF585AQ6P3V2 769 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 Q6ZNB5 142 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 NAA40Q86UY6 237 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 LIX1LQ8IVB5 337 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TEX19Q8NA77 164 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 PLPP7Q8NBV4 271 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 OR13C5Q8NGS8 318 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ST7LQ8TDW4 575 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RAB40AQ8WXH6 277 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 PRRT1Q99946 306 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SLC6A14Q9UN76 642 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 EMC9Q9Y3B6 208 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 V9GYH0 126 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 AIPO00170 330 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 HCRTR1O43613 425 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TSPAN15O95858 294 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 IFNA2P01563 188 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 IFNA4P05014 189 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 GIPP09681 153 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RAB13P51153 203 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 MRPL49Q13405 166 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM176BQ3YBM2 270 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 UNQ6126/PRO20091Q6UXV3 157 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TMEM200AQ86VY9 491 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SGPP2Q8IWX5 399 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 OR51D1Q8NGF3 324 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 TEAD3Q99594 435 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SAGE1Q9NXZ1 904 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SCN1AP35498 2009 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 P2RY10O00398 339 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SLC35E2P0CK97 266 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 CPEP16870 476 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 RAB6AP20340 208 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SELENOVP59797 346 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 YBX1P67809 324 aaKnown RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 Q499Y3 187 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 C14orf28Q4W4Y0 310 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 C8orf82Q6P1X6 216 aaPredicted RBP7.42□□□□□ -1.22
UBE4B-202ENST00000343090 DNAAF1Q8NEP3 725 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 GLYATL2Q8WU03 294 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 HSD17B8Q92506 261 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 HHIPL1Q96JK4 782 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SLC6A18Q96N87 628 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ASB16Q96NS5 453 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 WDFY2Q96P53 400 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SGPP1Q9BX95 441 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 PIGMQ9H3S5 423 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SMCO4Q9NRQ5 59 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SIRT5Q9NXA8 310 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 ASH2LQ9UBL3 628 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 SUSD2Q9UGT4 822 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 POMT2Q9UKY4 750 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 FLVCR2Q9UPI3 526 aa7.42□□□□□ -1.22
UBE4B-202ENST00000343090 STRCP1A6NGW2 1772 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 A0A0B4J203 849 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 IGHV3-20A0A0C4DH32 117 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FGF17O60258 216 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 BSGP35613 385 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 ADPRHP54922 357 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 UBE2IP63279 158 aaKnown RBP7.41□□□□□ -1.22
UBE4B-202ENST00000343090 MEP1BQ16820 701 aa7.41□□□□□ -1.22
UBE4B-202ENST00000343090 FAM209BQ5JX69 171 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms