RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 QDPRP09417 244 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 DUSP2Q05923 314 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 IHHQ14623 411 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 Q499Y3 187 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 SLC35D3Q5M8T2 416 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 MRGPRX4Q96LA9 322 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 FAM60AQ9NP50 221 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 NOX4Q9NPH5 578 aa13.73□□□□□ -0.21
C9orf47-201ENST00000334490 PAQR5Q9NXK6 330 aaPredicted RBP13.73□□□□□ -0.21
C9orf47-201ENST00000334490 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 GAPDHSO14556 408 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 IL1AP01583 271 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 HOXB3P14651 431 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 DNASE1P24855 282 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 GABRA5P31644 462 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 OPRL1P41146 370 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 GPR176Q14439 515 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 SF3A2Q15428 464 aaKnown RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 PTOV1Q86YD1 416 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 RPL3LQ92901 407 aaKnown RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 PLAC1Q9HBJ0 212 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 MAN2C1Q9NTJ4 1040 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 PLA2G3Q9NZ20 509 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 NUP214P35658 2090 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 SURF4O15260 269 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 HPGDSO60760 199 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 TP53P04637 393 aaPredicted RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CD34P28906 385 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CAV3P56539 151 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CLDN12P56749 244 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 GSG1LQ6UXU4 331 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 AMER3Q8N944 861 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 EXD3Q8N9H8 876 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 LANCL2Q9NS86 450 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 SVILO95425 2214 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 MRPS10P82664 201 aaKnown RBP13.72□□□□□ -0.21
C9orf47-201ENST00000334490 TBC1D28Q2M2D7 210 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CHPT1Q8WUD6 406 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 TEAD3Q99594 435 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 FKRPQ9H9S5 495 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 B3GNT2Q9NY97 397 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 LUZP4Q9P127 313 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CROCCQ5TZA2 2017 aa13.72□□□□□ -0.21
C9orf47-201ENST00000334490 CSF1P09603 554 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 EDN3P14138 238 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 HLA-DMAP28067 261 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 EMDP50402 254 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 CXADRP78310 365 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 FAPQ12884 760 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 PLK5Q496M5 336 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 FAM219BQ5XKK7 198 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF620Q6ZNG0 422 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 PXKQ7Z7A4 578 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ARIH2OSQ8N7S6 290 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 BHLHE23Q8NDY6 225 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 OR4K15Q8NH41 348 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 LIPHQ8WWY8 451 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 DUSP15Q9H1R2 295 aaPredicted RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 EMC7Q9NPA0 242 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SEC14L2O76054 403 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SLC34A2O95436 690 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 IFNA5P01569 189 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 RPS25P62851 125 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ALKBH1Q13686 389 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 VN1R4Q7Z5H5 301 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ANKRD13BQ86YJ7 626 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 CARFQ8N187 725 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 OR52I1Q8NGK6 324 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 CMSS1Q9BQ75 279 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 OR52A1Q9UKL2 312 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ZNF346Q9UL40 294 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 TRAV17A0A0B4J275 112 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 NOTOA8MTQ0 251 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 FZD7O75084 574 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ATP1B1P05026 303 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SDHBP21912 280 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 ZXDAP98168 799 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 TEKQ02763 1124 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 RPL18Q07020 188 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 PWWP2BQ6NUJ5 590 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SLC16A9Q7RTY1 509 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 OVCH1Q7RTY7 1134 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SGPP2Q8IWX5 399 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 OR11G2Q8NGC1 345 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 TCEAL3Q969E4 200 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 C7orf34Q96L11 122 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SLC38A1Q9H2H9 487 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 CRLF2Q9HC73 371 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 SLC22A11Q9NSA0 550 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 MED29Q9NX70 200 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
C9orf47-201ENST00000334490 NEU3Q9UQ49 428 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 RP1P56715 2156 aa13.71□□□□□ -0.21
C9orf47-201ENST00000334490 MSR1P21757 451 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 ERVK-16P61578 105 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 IKZF1Q13422 519 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 FCRL6Q6DN72 434 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 NAXDQ8IW45 347 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms