RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 NARSO43776 548 aaKnown RBP16.57■□□□□ 0.24
PKP3-201ENST00000331563 GKN3PP0CG01 181 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 PSMB5P28074 263 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 OR4C11Q6IEV9 310 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 OR5AR1Q8NGP9 310 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 OR1J4Q8NGS1 313 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 OR6N1Q8NGY5 312 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 ADAMTS15Q8TE58 950 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 MIB2Q96AX9 1013 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 ARSGQ96EG1 525 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 RHOVQ96L33 236 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 TMPRSS5Q9H3S3 457 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 ZNF337Q9Y3M9 751 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 ATG2AQ2TAZ0 1938 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 A0A1W2PPE3 182 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 C9orf170A2RU37 121 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 HOXC4P09017 264 aaPredicted RBP16.57■□□□□ 0.24
PKP3-201ENST00000331563 ABOP16442 354 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 MNDAP41218 407 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 SOX2P48431 317 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 CASP6P55212 293 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 RAB2AP61019 212 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 SRSF3P84103 164 aaKnown RBP16.57■□□□□ 0.24
PKP3-201ENST00000331563 ALKBH2Q6NS38 261 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 FRRS1Q6ZNA5 592 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 MACROD1Q9BQ69 325 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 SLITRK2Q9H156 845 aa16.57■□□□□ 0.24
PKP3-201ENST00000331563 MRPS30Q9NP92 439 aaKnown RBP16.57■□□□□ 0.24
PKP3-201ENST00000331563 CDV3Q9UKY7 258 aaKnown RBP16.57■□□□□ 0.24
PKP3-201ENST00000331563 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.56■□□□□ 0.24
PKP3-201ENST00000331563 OR2F2O95006 317 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 ACTL6AO96019 429 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 CSF1P09603 554 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 GUCA2AQ02747 115 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 OR2F1Q13607 317 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 HNRNPA1L2Q32P51 320 aaKnown RBP16.56■□□□□ 0.24
PKP3-201ENST00000331563 DPPA4Q7L190 304 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 SDR9C7Q8NEX9 313 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 CLDND1Q9NY35 253 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 ZNF443Q9Y2A4 671 aaPredicted RBP16.56■□□□□ 0.24
PKP3-201ENST00000331563 IDSB3KWA1 339 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 STMND1H3BQB6 276 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 FCARP24071 287 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 DUSP2Q05923 314 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 POU4F2Q12837 409 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 LCTLQ6UWM7 567 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 OR52E2Q8NGJ4 325 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 RNASE11Q8TAA1 199 aaKnown RBP16.56■□□□□ 0.24
PKP3-201ENST00000331563 CCDC107Q8WV48 283 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 BPIFA2Q96DR5 249 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 MEGF10Q96KG7 1140 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 MFRPQ9BY79 579 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 RHBGQ9H310 441 aa16.56■□□□□ 0.24
PKP3-201ENST00000331563 H3BSH0 61 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 H7C417 338 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 CCSO14618 274 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 OIP5O43482 229 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 GLSO94925 669 aaPredicted RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 C6P13671 934 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 WDR88Q6ZMY6 472 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 RTL10Q7L3V2 364 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 RANBP3LQ86VV4 465 aaPredicted RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 ZNF561Q8N587 486 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 FGF14Q92915 247 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 ARL11Q969Q4 196 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 CNRIP1Q96F85 164 aaPredicted RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 PHYHIPLQ96FC7 376 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 CNN2Q99439 309 aaKnown RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 EGLN1Q9GZT9 426 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 TAS2R8Q9NYW2 309 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 USP36Q9P275 1121 aaKnown RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 MTFP1Q9UDX5 166 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 COL6A3P12111 3177 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 IMPA2O14732 288 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 PAPLNO95428 1278 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 CD3DP04234 171 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 OR4E1P0C645 316 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 AKAIN1P0CW23 69 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 ILF3Q12906 894 aaKnown RBP eCLIP16.55■□□□□ 0.24
PKP3-201ENST00000331563 TMEM64Q6YI46 380 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 UBE3DQ7Z6J8 389 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 SLC35F2Q8IXU6 374 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 OR9A2Q8NGT5 310 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 OR4K13Q8NH42 304 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 SLC27A6Q9Y2P4 619 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 EMC8O43402 210 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 IFNGP01579 166 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 ADRB3P13945 408 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 GRPRP30550 384 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 GJA4P35212 333 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 SEC13P55735 322 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 LTBQ06643 244 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 ERV3-1Q14264 604 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 RBM39Q14498 530 aaKnown RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 SLC9A5Q14940 896 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 PLEKHN1Q494U1 663 aaPredicted RBP16.55■□□□□ 0.24
PKP3-201ENST00000331563 PRAMEF8Q5VWM4 474 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 PRAMEF7Q5VXH5 474 aa16.55■□□□□ 0.24
PKP3-201ENST00000331563 MRM1Q6IN84 353 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms