RNA–Protein interactions for RNA: ENST00000294623.8

FUBP1-201, Transcript of far upstream element binding protein 1, humanhuman

TSL 1 (best)

Gene FUBP1, Length 2,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP1-201ENST00000294623 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 MEPEQ9NQ76 525 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 PARP11Q9NR21 331 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 CACFD1Q9UGQ2 172 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 ZNF230Q9UIE0 474 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 WDR45Q9Y484 360 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 TMEM184BQ9Y519 407 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 KCNE3Q9Y6H6 103 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 KIAA1549LQ6ZVL6 1849 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 GRM6O15303 877 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 DUSP11O75319 330 aaKnown RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 NTN1O95631 604 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 CBR1P16152 277 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 CPT2P23786 658 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 CLDN12P56749 244 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 ZNF684Q5T5D7 378 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 SLC8B1Q6J4K2 584 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 RSPO2Q6UXX9 243 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 WDR88Q6ZMY6 472 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 PAQR4Q8N4S7 273 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 PHOSPHO2Q8TCD6 241 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 RGP1Q92546 391 aaPredicted RBP12.98□□□□□ -0.33
FUBP1-201ENST00000294623 C16orf58Q96GQ5 468 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 MICU1Q9BPX6 476 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 DNAJB11Q9UBS4 358 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 PCDHGA1Q9Y5H4 931 aa12.98□□□□□ -0.33
FUBP1-201ENST00000294623 TBC1D3DA0A087WVF3 549 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TBC1D3IA0A087WXS9 549 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TRBV23-1A0A0A0MS06 115 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 LOC100289279A0A1B0GTE1 492 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TBC1D3LB9A6J9 549 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 HLA-AP01891 365 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CRHP06850 196 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 HOXB5P09067 269 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 HOXA5P20719 270 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 GABRR2P28476 465 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ACTR1BP42025 376 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 F2RL1P55085 397 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TAS2R31P59538 309 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ALKBH1Q13686 389 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 KCNAB1Q14722 419 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 AGERQ15109 404 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TBC1D3CQ6IPX1 549 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 HMGN2P46Q86SG4 172 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TMEM150AQ86TG1 271 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TBC1D3Q8IZP1 549 aaPredicted RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 BOLLQ8N9W6 283 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 OR5AK2Q8NH90 309 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 PFN4Q8NHR9 129 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ZMYND19Q96E35 227 aaPredicted RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 LMAN1LQ9HAT1 526 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CYTL1Q9NRR1 136 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 C2orf42Q9NWW7 574 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CHRNA9Q9UGM1 479 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 NTNG1Q9Y2I2 539 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 MDC1Q14676 2089 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ZFPL1O95159 310 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CLUP10909 449 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 AKR1A1P14550 325 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ITGA3P26006 1051 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 S100A2P29034 98 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 PBLDP30039 288 aaPredicted RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 GJA5P36382 358 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 RIDAP52758 137 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 PDX1P52945 283 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 SRSF3P84103 164 aaKnown RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 OR52W1Q6IF63 320 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 SLC48A1Q6P1K1 146 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ZCCHC12Q6PEW1 402 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 ZNF765Q7L2R6 523 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 RAB7BQ96AH8 199 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CCDC74AQ96AQ1 378 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 LMLNQ96KR4 655 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CLCC1Q96S66 551 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 MYADMQ96S97 322 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 TWSG1Q9GZX9 223 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 CHMP1AQ9HD42 196 aaPredicted RBP12.97□□□□□ -0.33
FUBP1-201ENST00000294623 GPR34Q9UPC5 381 aa12.97□□□□□ -0.33
FUBP1-201ENST00000294623 COL4A6Q14031 1691 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 A0A0B4J2A0 478 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 TGM5O43548 720 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 PRKRAO75569 313 aaKnown RBP12.96□□□□□ -0.33
FUBP1-201ENST00000294623 NDUFB2O95178 105 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 AMY2AP04746 511 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 PTHLHP12272 177 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 LAMP2P13473 410 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 F3P13726 295 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 ADRA2CP18825 462 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 CDX1P47902 265 aaPredicted RBP12.96□□□□□ -0.33
FUBP1-201ENST00000294623 HGFACQ04756 655 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 SLC29A4Q7RTT9 530 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 ZNF619Q8N2I2 560 aa12.96□□□□□ -0.33
FUBP1-201ENST00000294623 SULT4A1Q9BR01 284 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms