RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 A0A1W2PNR3 127 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 BET1O15155 118 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 VEGFCP49767 419 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 RBM45Q8IUH3 476 aaKnown RBP17■□□□□ 0.31
PCDH1-201ENST00000287008 BPIFB2Q8N4F0 458 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 RAB3CQ96E17 227 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 TCEAL2Q9H3H9 227 aaPredicted RBP17■□□□□ 0.31
PCDH1-201ENST00000287008 CPNE5Q9HCH3 593 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 I6L893 689 aaPredicted RBP17■□□□□ 0.31
PCDH1-201ENST00000287008 P2RX6O15547 441 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 FCMRO60667 390 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 STK17BO94768 372 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 MT-CO3P00414 261 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 CISD3P0C7P0 127 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 CDK4P11802 303 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 TAS2R20P59543 309 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 TFF2Q03403 129 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 DUSP8Q13202 625 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 Q7L0L9 218 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 MUL1Q969V5 352 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 SELENOIQ9C0D9 397 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 PSORS1C1Q9UIG5 152 aa17■□□□□ 0.31
PCDH1-201ENST00000287008 C7orf72A4D263 438 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 MSR1P21757 451 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 LGALS4P56470 323 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 RUNX2Q13950 521 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 OR8B8Q15620 311 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 SLC22A24Q8N4F4 322 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ACKR4Q9NPB9 350 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 TMEM100Q9NV29 134 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 TRGV8A0A0C4DH27 118 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ACOT8O14734 319 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 CXCL13O43927 109 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ALKBH1Q13686 389 aaKnown RBP16.99■□□□□ 0.31
PCDH1-201ENST00000287008 PLK5Q496M5 336 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF385BQ569K4 471 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 OR6V1Q8N148 313 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF681Q96N22 645 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 PBDC1Q9BVG4 233 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 CRLF2Q9HC73 371 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 NRIP3Q9NQ35 241 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 DIMT1Q9UNQ2 313 aaKnown RBP16.99■□□□□ 0.31
PCDH1-201ENST00000287008 HRH3Q9Y5N1 445 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 ATF4P18848 351 aaPredicted RBP16.99■□□□□ 0.31
PCDH1-201ENST00000287008 EVI2BP34910 448 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 RPL23AP62750 156 aaKnown RBP16.99■□□□□ 0.31
PCDH1-201ENST00000287008 TMEM246Q9BRR3 403 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 OR52A1Q9UKL2 312 aa16.99■□□□□ 0.31
PCDH1-201ENST00000287008 CRYAAP02489 173 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 HOXC8P31273 242 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 TTC9Q92623 222 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 GATA6Q92908 595 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PPA2Q9H2U2 334 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 CLDN24A6NM45 220 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 CEBPZOSA8MTT3 80 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 GPR137BO60478 399 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 EDDM3BP56851 147 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 BCL2A1Q16548 175 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.98■□□□□ 0.31
PCDH1-201ENST00000287008 OCSTAMPQ9BR26 566 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 RGCCQ9H4X1 137 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PIP5K1CO60331 668 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ATP6V1G1O75348 118 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 IFNA17P01571 189 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 HEXAP06865 529 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ZNF93P35789 620 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-201ENST00000287008 SNCAP37840 140 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 CLDN12P56749 244 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 EXD3Q8N9H8 876 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 BHLHE23Q8NDY6 225 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 FAM71CQ8NEG0 241 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 OR4M1Q8NGD0 313 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 NUDT8Q8WV74 236 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 SGK3Q96BR1 496 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PRRX2Q99811 253 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 DPCDQ9BVM2 203 aaPredicted RBP16.98■□□□□ 0.31
PCDH1-201ENST00000287008 CD300AQ9UGN4 299 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 NKX6-3A6NJ46 265 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 RNF212BA8MTL3 300 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 F5H5P2 479 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ADAM23O75077 832 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ICOSLGO75144 302 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PEX11BO96011 259 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 GSTP1P09211 210 aaKnown RBP16.98■□□□□ 0.31
PCDH1-201ENST00000287008 LIPCP11150 499 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 SLC2A1P11166 492 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 S100PP25815 95 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 B4GALNT1Q00973 533 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 SLC14A1Q13336 389 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 ZMAT1Q5H9K5 638 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PRAMEF9Q5VWM5 478 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 TCTN3Q6NUS6 607 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 GUSBP11Q6P575 273 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 H1FXQ92522 213 aaKnown RBP16.98■□□□□ 0.31
PCDH1-201ENST00000287008 DCUN1D4Q92564 292 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 FAM210AQ96ND0 272 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 OR11A1Q9GZK7 315 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 PROCRQ9UNN8 238 aa16.98■□□□□ 0.31
PCDH1-201ENST00000287008 STRCQ7RTU9 1775 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms