RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CD38P28907 300 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 GALNSP34059 522 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 FASLGP48023 281 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 P2RX1P51575 399 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 AP3S2P59780 193 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 COL28A1Q2UY09 1125 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 DPY19L4Q7Z388 723 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 DND1Q8IYX4 353 aaKnown RBP13.05□□□□□ -0.32
HIF3A-202ENST00000244303 EID2Q8N6I1 236 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 RAB40AQ8WXH6 277 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 TAAR8Q969N4 342 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 ADOQ96SZ5 270 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 MRI1Q9BV20 369 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 RTN4RQ9BZR6 473 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 OR8D2Q9GZM6 311 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 WDR76Q9H967 626 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 SCP2D1Q9UJQ7 156 aa13.05□□□□□ -0.32
HIF3A-202ENST00000244303 TRBV5-5A0A0J9YX44 114 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ANKRD20A5PA0PJZ0 165 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 NAP1L6A6NFF2 107 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ARPC1BO15143 372 aaKnown RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TMEM127O75204 238 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TGM6O95932 706 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 MAS1P04201 325 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TMIGD3P0DMS9 266 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 NME1P15531 152 aaKnown RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 SSTR2P30874 369 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 PPICP45877 212 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF81P51508 661 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ART1P52961 327 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 RPL6Q02878 288 aaKnown RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ODF4Q2M2E3 257 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 POMZP3Q6PJE2 187 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 LRRTM1Q86UE6 522 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TMPRSS12Q86WS5 348 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 GKN2Q86XP6 184 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 OR2T4Q8NH00 348 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 OR10AC1Q8NH08 325 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 MIB2Q96AX9 1013 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 METTL17Q9H7H0 456 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 LANCL2Q9NS86 450 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 COQ3Q9NZJ6 369 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 EMC3Q9P0I2 261 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 NPTNQ9Y639 398 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 PRUNE2Q8WUY3 3088 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TRAV8-7A0A075B6U6 113 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 C17orf51A8MQB3 221 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 G3V3Q6 166 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 H0YIG0 161 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ICOSLGO75144 302 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TOXO94900 526 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 DCTDP32321 178 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TAS2R20P59543 309 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 SNTA1Q13424 505 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 EMC4Q5J8M3 183 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ELFN2Q5R3F8 820 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 SEZ6L2Q6UXD5 910 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 NLRC3Q7RTR2 1065 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 KANSL1Q7Z3B3 1105 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 CDH24Q86UP0 819 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 OR51A4Q8NGJ6 313 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 OR2T35Q8NGX2 323 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 CEP76Q8TAP6 659 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 THEM6Q8WUY1 208 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 PCNPQ8WW12 178 aaKnown RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TSLPQ969D9 159 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 CCDC74AQ96AQ1 378 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 NXPE2Q96DL1 559 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 SORCS2Q96PQ0 1159 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 GAL3ST4Q96RP7 486 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 SYT4Q9H2B2 425 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 TAS2R10Q9NYW0 307 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF224Q9NZL3 707 aa13.04□□□□□ -0.32
HIF3A-202ENST00000244303 ING1Q9UK53 422 aaPredicted RBP13.04□□□□□ -0.32
HIF3A-202ENST00000244303 RP1P56715 2156 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 COL5A1P20908 1838 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-202ENST00000244303 CCDC85CA6NKD9 419 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 OR4C45A6NMZ5 311 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 PRAF2O60831 178 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 RENP00797 406 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 IFNA7P01567 189 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 RAB14P61106 215 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF117Q03924 483 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 PLA2G7Q13093 441 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 KCNAB1Q14722 419 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 TCTE1Q5JU00 501 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 OLFML2AQ68BL7 652 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 SLC25A25Q6KCM7 469 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 TMEM151BQ8IW70 566 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 ZNF676Q8N7Q3 588 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 OR2G2Q8NGZ5 317 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 OR8K3Q8NH51 312 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 NSMAFQ92636 917 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 LCORQ96JN0 433 aaPredicted RBP13.03□□□□□ -0.32
HIF3A-202ENST00000244303 SLC46A1Q96NT5 459 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 SEC22CQ9BRL7 303 aa13.03□□□□□ -0.32
HIF3A-202ENST00000244303 ULBP3Q9BZM4 244 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms