RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 FAM131CQ96AQ9 280 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 RBM18Q96H35 190 aaKnown RBP9.68□□□□□ -0.86
USP28-201ENST00000003302 SOX7Q9BT81 388 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 DHCR7Q9UBM7 475 aaKnown RBP9.68□□□□□ -0.86
USP28-201ENST00000003302 KCNN3Q9UGI6 736 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 POMT2Q9UKY4 750 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 OR10H1Q9Y4A9 318 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 ANKRD20A5PA0PJZ0 165 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 SHISA8B8ZZ34 492 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 M0R233 179 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 TSPAN4O14817 238 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 OPN1LWP04000 364 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 RLN2P04090 185 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 NMBP08949 121 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 STX4Q12846 297 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 GRM7Q14831 915 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 NHLRC3Q5JS37 347 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 ANGPTL6Q8NI99 470 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 CCDC3Q9BQI4 270 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 RANBP3Q9H6Z4 567 aaPredicted RBP9.68□□□□□ -0.86
USP28-201ENST00000003302 GPR160Q9UJ42 338 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 FBXL2Q9UKC9 423 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 PCOLCE2Q9UKZ9 415 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 ZNF281Q9Y2X9 895 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 ANXA2P2A6NMY6 339 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 OR4C45A6NMZ5 311 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 PRKACBP22694 351 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 LCN1P31025 176 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 GALNT16Q8N428 558 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 GINS4Q9BRT9 223 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 OR10A5Q9H207 317 aa9.68□□□□□ -0.86
USP28-201ENST00000003302 OR2M5A3KFT3 312 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SERINC4A6NH21 518 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 UBE2IP63279 158 aaKnown RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 ZNF74Q16587 644 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 TMEM44Q2T9K0 475 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GLDNQ6ZMI3 551 aaPredicted RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 ZNF615Q8N8J6 731 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CCDC74AQ96AQ1 378 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 MMABQ96EY8 250 aaPredicted RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 SFXN1Q9H9B4 322 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 LYRM4Q9HD34 91 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 IGHV5-51A0A0C4DH38 117 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 MCRIP1C9JLW8 97 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SDC3O75056 442 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 OR7A10O76100 309 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 RLN1P04808 185 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 IFNA16P05015 189 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 FMODQ06828 376 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GGTLC2Q14390 218 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SHHQ15465 462 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 TEX19Q8NA77 164 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 OR2G2Q8NGZ5 317 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 HOXB13Q92826 284 aaPredicted RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 PMEPA1Q969W9 287 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 MMP25Q9NPA2 562 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 PRR13Q9NZ81 148 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 ABRACLQ9P1F3 81 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SPDEFO95238 335 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SLC35E2P0CK97 266 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 UBL4AP11441 157 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GABRG2P18507 467 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 ACHEP22303 614 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 FOXK1P85037 733 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 HHEXQ03014 270 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CORO6Q6QEF8 472 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CDH24Q86UP0 819 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CMIPQ8IY22 773 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SLC25A36Q96CQ1 311 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 ADAD1Q96M93 576 aaKnown RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 TINAGL1Q9GZM7 467 aaPredicted RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 TAS2R10Q9NYW0 307 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SCP2D1Q9UJQ7 156 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 FXYD6-FXYD2A0A087WZ82 144 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 FITM1A5D6W6 292 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GABARAPH6UMI1 98 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 HOXD4P09016 255 aaPredicted RBP9.67□□□□□ -0.86
USP28-201ENST00000003302 CCKBRP32239 447 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 HYAL1Q12794 435 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 TMEM81Q6P7N7 255 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 TAF8Q7Z7C8 310 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 RPS4Y2Q8TD47 263 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 SPACA5Q96QH8 159 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GABRG3Q99928 467 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 GSX2Q9BZM3 304 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 OR8D2Q9GZM6 311 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 FXYD6Q9H0Q3 95 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CLEC1BQ9P126 229 aa9.67□□□□□ -0.86
USP28-201ENST00000003302 CSMD1Q96PZ7 3565 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 IGHV3-20A0A0C4DH32 117 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 TCRBV21S2A2A0A5A6 115 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 ICOSLGO75144 302 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 KRT33AO76009 404 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 ICAM2P13598 275 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 VWA2Q5GFL6 755 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 SLC6A19Q695T7 634 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 SLC36A1Q7Z2H8 476 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
USP28-201ENST00000003302 TOR1AIP2Q8NFQ8 470 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms