RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 Tnfrsf21Q9EPU5 655 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Jmjd6Q9ERI5 403 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Stub1Q9WUD1 304 aa20.78■□□□□ 0.92
Upf3a-201ENSMUST00000043767 PvrigA0A1B0GS01 234 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Skint2A7XUX6 400 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 BC035947B2RQY6 695 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 F10O88947 481 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nr4a1P12813 601 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Hoxa10P31310 416 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Alox12eP55249 662 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Nkx3-2P97503 333 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Laptm5Q61168 261 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Olfr598Q7TRR2 319 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cox10Q8CFY5 443 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Mzt2Q9CQ25 159 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tmem269Q9D4Y8 254 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Tmem176aQ9DCS1 244 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Vmn1r10W4VSP8 311 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cd38P56528 304 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Khdc4Q3TCX3 612 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Cdk10Q3UMM4 360 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Sqstm1Q64337 442 aaKnown RBP20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 1700001J03RikQ80ZR8 219 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 EsamQ925F2 394 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Exo5Q9CXP9 373 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Lyzl6Q9DA11 148 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Slco1b2Q9JJL3 689 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Npas3Q9QZQ0 925 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Adam11Q9R1V4 773 aa20.77■□□□□ 0.92
Upf3a-201ENSMUST00000043767 Gm20518E9Q548 580 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm5796E9Q7M8 205 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm3629K7N6Y2 205 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm10340K7N708 205 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Nmur1O55040 428 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Klrb1cP27814 223 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Sftpa1P35242 248 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 D13Ertd608eQ3UPR8 151 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Obox3Q3UT54 335 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Olfr290Q7TS13 315 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 F12Q80YC5 597 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Rgs7bpQ8BQP9 257 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 MepeQ8K4L6 441 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Ppil3Q9D6L8 161 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm5407E9Q7Q1 248 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 P01634 136 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 S100a6P14069 89 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 TstP52196 297 aaKnown RBP20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Mfap2P55002 183 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Hrh3P58406 445 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Fv1P70213 459 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Cd53Q61451 219 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Poldip3Q8BG81 420 aaKnown RBP20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Lrrc39Q8BGI7 337 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Tmprss7Q8BIK6 829 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Lysmd4Q8CC84 293 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Olfr1090Q8VGA6 313 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Tmem25Q9DCF1 365 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Padi1Q9Z185 662 aa20.76■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Celsr1O35161 3034 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm884A2A9H6 3643 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Stpg3A2RSX4 306 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Zfp229E9PWT2 705 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm11397F6V5V4 377 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Rpl7P14148 270 aaKnown RBP20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 CpeQ00493 476 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Myl12bQ3THE2 172 aaKnown RBP20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Mex3dQ3UE17 643 aaKnown RBP20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Mylk4Q5SUV5 386 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Dpp10Q6NXK7 797 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Serpinb9fQ80UK5 377 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Vangl1Q80Z96 526 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 QdprQ8BVI4 241 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Fbxo45Q8K3B1 286 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Vmn1r210Q8R274 306 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Atp5f1Q9CQQ7 256 aaKnown RBP20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Med31Q9CXU1 131 aaKnown RBP20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Med18Q9CZ82 208 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Zfp84Q9D654 559 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 CcniQ9Z2V9 377 aa20.75■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Zfp978A2A7I1 335 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 4930595D18RikD3Z642 64 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Vmn2r106E9PY92 862 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Ier3P46694 153 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Atp6v1e1P50518 226 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Rnf224Q3UIW8 156 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 ShhQ62226 437 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Shc4Q6S5L9 626 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Rdh10Q8VCH7 341 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Olfr1393Q8VFA7 311 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Ntn4Q9JI33 628 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 RlimQ9WTV7 600 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Vps13cQ8BX70 3748 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Zfand5O88878 213 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Mmp12P34960 473 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Ctf2P83714 204 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 UbqlnlQ14DL0 610 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Ctsll3Q3ULP7 331 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Sema3bQ62177 748 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Kng2Q6S9I3 644 aa20.74■□□□□ 0.91
Upf3a-201ENSMUST00000043767 Gm21627Q810R0 219 aa20.74■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 38.3 ms